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SCNpilot_cont_500_bf_scaffold_3670_11

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(5866..6750)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035E79DC similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 285.0
  • Bit_score: 390
  • Evalue 1.30e-105
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ32552.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 229.0
  • Bit_score: 305
  • Evalue 7.60e-80
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 290.0
  • Bit_score: 181
  • Evalue 4.90e-43

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Taxonomy

Bradyrhizobium sp. CCGE-LA001 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGTCTTGGCGCCGTCTGCCTCCACTTCATGCCATCCGCGCGTTCGACGCCGTCGCCCGGCACCTCTCGGTTACTCGCGCAGCCGAAGAACTCAGTGTCACGCCGGGCGCGGTCAGCCGGCACGTTCGCGCGCTCGAAGAGCATCTGGGAAAACCGTTGTTCCTGCGGCGCGCTACTGGGATGGCACTGACCACGGCTGGAGAAGCGCTGGCGCAGGCGACGCGAGAGGGACTCGACCGCATCGCCGACGGCGCAAGCGGCGTAAAGCTGAGGCGACTGCGCAGGCTTTCAATCGGCGTCTATGCCGTGATCGCTTCACGGCTCCTGCTGCCGCTATGGGCAGAGTTGCAGAAAGCCCATCCGGATCTTGAGATCGATCTACATACGAGCTCCAACCCGTTGGACCTCCTGCCGGGCCGCTTTGATGCCGTCATCATTGTGTCCGATGCCGCTCCAAGGGCGGGGCTGATAACCCGCCGTTTGATCCCGATCTCAACAGTGCCGGTCTGCGCACCCCATTGGTTGAAGCGCGGACCCCCCGATTTCGCCAAGGTACCGCTGTTGCACGCACGCCCCCGACCAGATGATTGGCGGCGTTGGCTCGACCATGCAGGCTTCAAATCGGTGCCGGTGCAGGGCGGCAGCAGTTTCCAGAGCATGGGGCTCGCGATTCAAGCAGCTGCAGCAGGTGTTGGCTTCGCGATTGCGATCAAGGAGCTTCCGCCGGTTGATCTAGCGCGCCGCAAGCTCGTGATCGCACACCCGACAGTGCGACAGACACGACGGCACTTCGTCCTGCAATACGAGGCGCGACTCGCGGACGAGCCGGCCCTGGCAGCCTTTGCGGATTGGATCACCAAGCGTCTCTCGACAGCTCTGTCTTGA
PROTEIN sequence
Length: 295
MSWRRLPPLHAIRAFDAVARHLSVTRAAEELSVTPGAVSRHVRALEEHLGKPLFLRRATGMALTTAGEALAQATREGLDRIADGASGVKLRRLRRLSIGVYAVIASRLLLPLWAELQKAHPDLEIDLHTSSNPLDLLPGRFDAVIIVSDAAPRAGLITRRLIPISTVPVCAPHWLKRGPPDFAKVPLLHARPRPDDWRRWLDHAGFKSVPVQGGSSFQSMGLAIQAAAAGVGFAIAIKELPPVDLARRKLVIAHPTVRQTRRHFVLQYEARLADEPALAAFADWITKRLSTALS*