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SCNpilot_cont_500_bf_scaffold_10889_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1..540

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002E0D830 similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 180.0
  • Bit_score: 228
  • Evalue 5.20e-57
Transcriptional regulator {ECO:0000313|EMBL:ETR75615.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 179.0
  • Bit_score: 228
  • Evalue 5.50e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 178.0
  • Bit_score: 207
  • Evalue 3.90e-51

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
TTTCTGCTGCAGCAGTTGCCCATCCTGCTGGCGAGGGCGACCGACCTGTCGGTGCGCGCCGAGATCGGCCTCGAAGGCGATCTCATGGAGGGGCTCGTCGAGGGTCGGCTCGATATTGCGATCCTCTACACGCCGGAAAGCCGTCCCGGCCTCAAGGTCGAGTTCCTGTTCGACGATCGCCTCGTCCTGGTCTCGACCCGGGATCAACCGCGGCCGACCCCCGATGCAGGGTACGTCTATATCGACTGGGGGCCGGAGTTCCTGGCCCGCCACAGCGCGAGCTTTCCTGAATTCTTTGGCGCCGCCCTCACCGCCAATATCGGCTGGCTCGGCCTGCAGCATGTGCTGGCGAACGGCGGCTCGGGCTACTTCCCTATCCGCCTGGTACGCCCCCACCTCGAGAGCCACCGGCTCGTCGTCGTGCCGGGGGCGCCGGAATTCTCGATTTCGGCTCACCTCGTCTGGCCGGCCGATGCCGAGCCGAACGTCGTCGGCCCGGCGCTCGATCTCATTCGTTCGGCAGCGGCAGCGGAACGTTGA
PROTEIN sequence
Length: 180
FLLQQLPILLARATDLSVRAEIGLEGDLMEGLVEGRLDIAILYTPESRPGLKVEFLFDDRLVLVSTRDQPRPTPDAGYVYIDWGPEFLARHSASFPEFFGAALTANIGWLGLQHVLANGGSGYFPIRLVRPHLESHRLVVVPGAPEFSISAHLVWPADAEPNVVGPALDLIRSAAAAER*