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SCNpilot_cont_500_bf_scaffold_65889_1

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

near complete RP 45 / 55 BSCG 44 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: 1..1023

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9H4_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 349.0
  • Bit_score: 339
  • Evalue 3.90e-90
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 349.0
  • Bit_score: 339
  • Evalue 1.20e-90
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 342.0
  • Bit_score: 552
  • Evalue 3.20e-154

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
CCGCTGCTCGATACGCTCGGCGCCGAACTCAAGAAGCTGGTTCAGAAGGGCAAGGAGCGCGGCTACATCACCTATGACGAGCTGAACGCCGCGCTGCCGCCCGATGAAGTGTCCTCCGAGCAGATCGAGGACACGATGGCGATGCTGTCCGAAGCGGGCGTCAACGTCGTCGAGGCCGAAGAGCAGGAAGAAACCGCCACCAACCCGGCCGAGCCGGCGAAGACCGCCGTGGTCGCCGCCGAGGCGACCGGCGAGGACGAGGAACTCGGCCGCACCGACGATCCCGTCCGCATGTATCTGCGCGAGATGGGCAGCGTCGAGCTCTTGAGCCGCGAAGGCGAAATCGAGATCGCCAAACGCATCGAGGCCGGCCAGGACAAGATGATCGGCGGCATCTGCGAGAGCCCGATGACGATCACCGCGCTGCTGCACTGGCGCGATGCGATCAACGAGGGCCGCATCCTGCTGCGCGACGTCATCGATCTCGAAGCGACCCAGGGTGGCGGCGCTCCCGGCGAGGGCAAGGGCGCCATTCCCGCGGGCCAGCCGATCGTGGCTCCCACCGGTCCGCAGCTTCCGCGTCCGCCGATGCCGAAGCTCGTGCGCCCGCCCGCTCCGGCCGTTGCCGGCCCGGCCGGCGAAGGCGGCGGCGAAGCGACGCCGGGTGAAGGTGGCGAGGAGGACGACGAGAACGCCCTGTCGCTCTCGGCGCTCGAGGAGAAGCTCAAGCCCGAAGTCCTGCGGACCCTCACCAAGGTCTACAAAGTCTACATGGAGATGTCGAAGGTCCAGAACCGGCGCCTGTCGACTCTCAGCCGCGGCCAGAAGCCGAGCCCGGAATTCGAGAGGAGCTACGAAAAGCACCGCAAGAAGATCGTCGAGCTGGTGCGCACGGTACACATCAACGCCAACCGCATCGAGCAGCTCAAGCTCTCGCTCTACGACTTGAACCGCAAGCTGATGCTGCTCGAGGGCAAGCTGCTGCGCCAGGCCGAGACCTTCCGCATCCCGCGCCAGGACTTC
PROTEIN sequence
Length: 341
PLLDTLGAELKKLVQKGKERGYITYDELNAALPPDEVSSEQIEDTMAMLSEAGVNVVEAEEQEETATNPAEPAKTAVVAAEATGEDEELGRTDDPVRMYLREMGSVELLSREGEIEIAKRIEAGQDKMIGGICESPMTITALLHWRDAINEGRILLRDVIDLEATQGGGAPGEGKGAIPAGQPIVAPTGPQLPRPPMPKLVRPPAPAVAGPAGEGGGEATPGEGGEEDDENALSLSALEEKLKPEVLRTLTKVYKVYMEMSKVQNRRLSTLSRGQKPSPEFERSYEKHRKKIVELVRTVHINANRIEQLKLSLYDLNRKLMLLEGKLLRQAETFRIPRQDF