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SCNpilot_cont_500_bf_scaffold_12096_1

Organism: SCNPILOT_CONT_500_P_Delftia_66_8_1

partial RP 34 / 55 MC: 1 BSCG 33 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1..435

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel protein n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029B1BE0 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 144.0
  • Bit_score: 225
  • Evalue 3.50e-56
Ligand-gated channel protein {ECO:0000313|EMBL:KGH28193.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 144.0
  • Bit_score: 230
  • Evalue 1.20e-57
putative TonB-dependent siderophore receptor similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 144.0
  • Bit_score: 215
  • Evalue 1.10e-53

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
CTGGAAGCCGAAGTCAGCGGCGAAGTGCTGCGCGGCCTGCAGCTCATGGCCGGCTACACCTACAACACCACCAGGTTCCTCAGCGACCCCGTCAACCAGGGCAAGGTCTTCAGCACCTGGACGCCCCGGCACATGCTGCGCGCCTGGGCCGCCTATCGCCTGCCCGGTCAATGGAGCCGCCTGAACGTGGGTGCCGGCTTCACTGCACAGACCCATACCTTGGGCTATGACCGCTCCTTCAAGGTCCCCGGCTTCACCGTCTGGAACATGCGCCTGGCCTACCAGCTCACCCCCGAAGTCAGCCTTGCCATGAACCTCAACAACGTCTTCGACAAGCGCTACTGGATCCCCGGCTTTGCCGAGCAAAACGGCAACAACGACTTCGGCGACCCGCGCAACGTCATGTTCACGCTCAAGTACACGCCGCGCATCTGA
PROTEIN sequence
Length: 145
LEAEVSGEVLRGLQLMAGYTYNTTRFLSDPVNQGKVFSTWTPRHMLRAWAAYRLPGQWSRLNVGAGFTAQTHTLGYDRSFKVPGFTVWNMRLAYQLTPEVSLAMNLNNVFDKRYWIPGFAEQNGNNDFGDPRNVMFTLKYTPRI*