ggKbase home page

SCNpilot_cont_500_bf_scaffold_7344_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

partial RP 33 / 55 MC: 1 BSCG 33 / 51 MC: 3 ASCG 8 / 38
Location: comp(4232..5056)

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum DSM 19469.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 287.0
  • Bit_score: 337
  • Evalue 1.30e-89
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 283.0
  • Bit_score: 331
  • Evalue 3.50e-88
UPI0003D1B091 related cluster n=1 Tax=unknown RepID=UPI0003D1B091 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 283.0
  • Bit_score: 333
  • Evalue 1.70e-88
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseibacterium elongatum → Roseibacterium → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGCCCGAATTGCCTGAGGTCGAAACCGTCCGGCAGGGTCTCCTTCCTGCCATGGAAGGCCACCGGTTTACCAAGGTCATCACCCGCCGCGGCGATTTGCGCCGCCCTTTTCCAAAAGATTTCGCCACCCGGCTGACCGGCCGCCGGGTCCTGCGCCTCGCCCGCCGGGCCAAATATATCCTGGCCGAACTGGACAACGGGGAGGACCTCGTCATCCACCTGGGCATGAGCGGGCGGATGAGCGTGTCGGCCGACGCAGACGGCGCCCCCGGCAAACACGATCATGTGGTGATGGAGACCGATGCCCCCGCCCGCATCATCTTCACCGACCATCGCCGCTTCGGGCTGATGACGTTGCTGCCGCATGATGGTCTCGACAGCGATCCCCTGTTCAAGGGCCTCGGGCCGGAGCCGTTGTCGCCCGCCTTCGATGCCGCCTTTCTGAAAAAAGCGCTGGCGGGCAAACGCACGCCGATCAAATCCGCCCTGCTCGATCAGCGGCTGATTGCGGGCCTCGGCAACATCTATGTCTGCGAAGCGCTCTACCGGGCCGGTATCTCACCGAAAAAACTGGCCGGTTCGGTCAGCGCGAAAGCGATCACCCCTCTTGCCCGCGCCATCAAGGCGGTTCTGGAAGATGCGATCAAGGCCGGCGGCTCCTCACTGCGCGATCATAAACAGGTCAATGGCGAACTCGGCTATTTCCAGCATCGCTTCCGGGTCTATGACCGCGAAGGCACGCCCTGCCCACGCTGCAAAACCCCGATCAAGCGCATCGTGCAGGCCGGCCGCTCCAGCTTCTATTGCCCGAAATGTCAGAGATAG
PROTEIN sequence
Length: 275
MPELPEVETVRQGLLPAMEGHRFTKVITRRGDLRRPFPKDFATRLTGRRVLRLARRAKYILAELDNGEDLVIHLGMSGRMSVSADADGAPGKHDHVVMETDAPARIIFTDHRRFGLMTLLPHDGLDSDPLFKGLGPEPLSPAFDAAFLKKALAGKRTPIKSALLDQRLIAGLGNIYVCEALYRAGISPKKLAGSVSAKAITPLARAIKAVLEDAIKAGGSSLRDHKQVNGELGYFQHRFRVYDREGTPCPRCKTPIKRIVQAGRSSFYCPKCQR*