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SCNpilot_cont_500_bf_scaffold_2448_13

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 13760..14203

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomona similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 144.0
  • Bit_score: 237
  • Evalue 1.70e-59
dxr; 1-deoxy-d-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 144.0
  • Bit_score: 232
  • Evalue 7.10e-59
1-deoxy-D-xylulose 5-phosphate reductoisomerase, partial n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036E1047 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 144.0
  • Bit_score: 240
  • Evalue 1.40e-60

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Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGCGGCCACGCCACTCGCTGGTCGAGTTCATCGACGGCTCCACCCTGGCCCAGCTTGGCCTGCCGGACATGCGCACCACCCTGGCGGTGGGCCTGGGCTGGCCGCGGCGCGTCGAATCGGGCGTGGCCGGGCTCGACCTGCTGACCCAGGGCCGGCTCGATTTCGAGGCGCCCGACCTGGACGCCTTCCCCTGCCTGCGCCTGGCCTGGCAGGCCATGGAGGCCGGCGGCAGCGCCCCGGCGATCCTGAACGCCGCCAACGAAGTTGCCGTTTCAGCCTTTCTTCAGGGCCGCATAGGCTTCCTGTCGATTCCCGCGCTGGTGGAACACGCGCTGTCCACACTGCCTCACATGGCTGCCGATACACTGGACGCCCTGCTGGCGGCCGACGCACGGTCCCGCCAGGTCACCTCCACCGCCATCGCCCGCCTGCCCCATGCCTGA
PROTEIN sequence
Length: 148
MRPRHSLVEFIDGSTLAQLGLPDMRTTLAVGLGWPRRVESGVAGLDLLTQGRLDFEAPDLDAFPCLRLAWQAMEAGGSAPAILNAANEVAVSAFLQGRIGFLSIPALVEHALSTLPHMAADTLDALLAADARSRQVTSTAIARLPHA*