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SCNpilot_cont_500_bf_scaffold_3307_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(322..1257)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A438CB similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 308.0
  • Bit_score: 359
  • Evalue 2.60e-96
  • rbh
LysR substrate binding domain protein {ECO:0000313|EMBL:ETN72013.1}; Flags: Fragment;; TaxID=51031 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;" source="Necator americanus (Human hookworm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 268.0
  • Bit_score: 411
  • Evalue 1.00e-111
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 304.0
  • Bit_score: 355
  • Evalue 1.50e-95
  • rbh

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Taxonomy

Necator americanus → Necator → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 936
ATGTTCACCCTGCGCCAGCTGGAATTCGTGGTCGCCGTCGCCGAGGAAGGCGGGTTCACCGCGGCGGCGGCGCGCTGCCACACCGTGCAGTCGGCGCTGAGCCACCAGGTGGCGCGGCTGGAGGAGGCCTTCGGTGCGCGCCTGTTCGAGCGCGGCCACCGCCAGGTGCGGCCCACCGCCGCCGGCGAGGTATTCCTGCGCAACGCCCGGCTCACCCTGCAGGCCGCCGACCGCCTGCAGGAGGAGATGGCGCTGGCGCTGGGCACGGTGCGCGGGCGCATCCGCATCGGCCAGATCACCGCGCTCACCGTGGTCGACGTCCCCGACCTGCTGGCCCGGTTCCGGGGCGCGTATCCGGCCGTGGACGTGCACCTGCGCGTGGGCATGAGCGAGGAGCTGCTGGCCGAGCTGGCCGAGGGCAGGCTGGACGTGGCCCTGGTCGGCGTCGGCCCGCAGGTGCCGCTGCCGGCGCAGCACCGCCTGCTCGACGAGGAAGGCCTGTCGCTGCTGCTGCCGCGCGGGCATGCATTGGCGGCGATGCAGCGGGTGCCGCTGCCCGCGCTCGACGGCGTCCCGCTGGCGGCGCTGGTTCCCGGCGCCGGCGTGCGCCGGATGATGGACGACGCCCTGCGCGAGCGCGGCGTCGCGCCGCGGCTGCAGTACGAGGTCAGCCATGGCGAACTGCTGCGGCAACTGGTGGCCGCCGGGCTCGCGGTCGCGGCGATCCCGGACAGCATGGCCGCGCGCATGCAGGGGGTGGACGTGCGCCCGCTGGCCGAGCCGTTCCGCTTCCGCACCTGCGCGGTCTGGCGCGCCGATCCCACGCCCGCCGCGCGCGCCCTGCTCGACCTGTTGCCCGCCGCCGCGACGCACGGGCCGCGCATCGAACCTGCTAAGGTGCGCCGCAAACCAAGGAACCCACGTGGCCGGCCATAA
PROTEIN sequence
Length: 312
MFTLRQLEFVVAVAEEGGFTAAAARCHTVQSALSHQVARLEEAFGARLFERGHRQVRPTAAGEVFLRNARLTLQAADRLQEEMALALGTVRGRIRIGQITALTVVDVPDLLARFRGAYPAVDVHLRVGMSEELLAELAEGRLDVALVGVGPQVPLPAQHRLLDEEGLSLLLPRGHALAAMQRVPLPALDGVPLAALVPGAGVRRMMDDALRERGVAPRLQYEVSHGELLRQLVAAGLAVAAIPDSMAARMQGVDVRPLAEPFRFRTCAVWRADPTPAARALLDLLPAAATHGPRIEPAKVRRKPRNPRGRP*