ggKbase home page

SCNpilot_cont_500_bf_scaffold_3307_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(10816..11133)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Xanthomonas RepID=UPI0002630251 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 176
  • Evalue 1.00e-41
Fis family transcriptional regulator {ECO:0000313|EMBL:AJC46208.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 90.0
  • Bit_score: 176
  • Evalue 1.50e-41
fis; DNA-binding protein Fis; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 90.0
  • Bit_score: 172
  • Evalue 6.20e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas sacchari → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGCCGGGCGCGTTCGCGCCGGCTCCGCTGAATCCGGGAAATCCCTTGAACGCTGCCCCACCCCGTCCTGACAACAGTCGTGGCGCTCCGAAGCCGCCGCTGCGCGAACACGTCGCCCAGTCCGTGCGCCGCTACCTGCGCGATCTGGATGGCTGCGATGCCGACGATGTCTATGAAATCGTCCTGCGCGAGATGGAGATTCCGCTGTTCGTGGAAGTGCTCAACCACTGCGAAGGCAACCAGAGCCGCGCCGCGGCGCTGCTGGGCATCCACCGCGCCACGCTGCGCAAGAAGCTCAAGGAATACGGGCTGGCCTGA
PROTEIN sequence
Length: 106
MPGAFAPAPLNPGNPLNAAPPRPDNSRGAPKPPLREHVAQSVRRYLRDLDGCDADDVYEIVLREMEIPLFVEVLNHCEGNQSRAAALLGIHRATLRKKLKEYGLA*