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SCNpilot_cont_500_bf_scaffold_3002_11

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(10255..10662)

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal body rod protein FlgC n=1 Tax=Xanthomonadaceae RepID=UPI00029B4028 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 135.0
  • Bit_score: 240
  • Evalue 9.90e-61
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 135.0
  • Bit_score: 239
  • Evalue 6.90e-61
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 135.0
  • Bit_score: 239
  • Evalue 3.10e-60

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGAGCAACCTGCCCATCTTCGACATCGCCGGCTCGGCGCTGCAGGCGCAGTCGGTGCGCATGAGCACCATCGCCTCCAACCTGTCCAACGCCGACACCGTGGCCGGTTCGGCCGACGCCGTCTACAAGCCGCTGGAACCGATCTTCCAGGCGGTCACCAGCCGCGAGGACCCGCGCCTGACCCGGGTGGAGGTCAAGCAGGTCACGCAGAGCGAAGCCCCGCCGCTCAAGCGCTACGAACCCCACCATCCGCTGGCCGACGGCGACGGCTACGTGTATTCGCCGGACATCGACCCGGTGGCGCAGATGGTCAATCTCATCTCCACCTCGCGCAACTACCAGGCCGGCGTGGAGATGCTCAACACGGCCAAGGAACTGACCCTGGCCACCCTGACCATGGGCCGCTGA
PROTEIN sequence
Length: 136
MSNLPIFDIAGSALQAQSVRMSTIASNLSNADTVAGSADAVYKPLEPIFQAVTSREDPRLTRVEVKQVTQSEAPPLKRYEPHHPLADGDGYVYSPDIDPVAQMVNLISTSRNYQAGVEMLNTAKELTLATLTMGR*