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SCNpilot_cont_500_bf_scaffold_4450_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1987..3339)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 450.0
  • Bit_score: 663
  • Evalue 2.90e-187
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 450.0
  • Bit_score: 659
  • Evalue 5.50e-187
  • rbh
tRNA modification GTPase TrmE n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6AB3A similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 443.0
  • Bit_score: 668
  • Evalue 4.90e-189
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGAACGACAGCGCCCGCCGCGACACCATCATCGCCATCGCCAGTGGCGCCGCTGCGGGCGGCGTCGGCATCGTTCGTCTTTCCGGTCCGCTGTCGGCGCCGATCGCGGGTGGGCTCGGCTGCCCCGCGCTGCGGCCGCGCCACGCCCACTACGCACGCTTCCGCGATGCGGACGGCGAGGTGATAGACGACGGCATCGCGTTGTACTTCCCCGGTCCGCGCAGCTTCACCGGCGAGGACGTGGTGGAACTGCAGGGCCATGGCAGCCCGGTGGTCCTGCGCCAGCTGCTGGAGCGTTGCATCGCCCTCGGTGCGCGCCAGGCCCGCGCCGGCGAGTTCAGCGAGCGCGCCTTCCTCAACGGCAAGCTCGACCTGGCCCAGGCCGAGGCCATCGCCGACCTGATCGCCGCCGGCGACGTGCGTGCCGCCCGCGCCGCCCGCCGCTCGCTCGACGGCGTGTTCTCGCGTCGCGTCGAGGACGTGGCCGAGCAGCTGGTGCGGCTGCGCATCCACGTCGAGGCCGCCATCGATTTTGCCGACGAACCGCTGGATACGCTGGGCGGGGCGCAGGTGCGTGCCGGCGTCGCCCAGGCGCGCGAGGCGCTGGCGCGGCTGTGCGTCGATGCCGAGCGTGGCCGCAAGCTGCGCGACGGCCTGCATGCGGTGCTGATCGGTCCACCCAACGCCGGCAAGAGCTCGCTGCTCAACGCCCTGGCCGGCAGCGAGCGCGCCATCGTCACCGATATCGCCGGCACCACCCGCGACACCCTGCGCGAGACCATCCGCATCGATGGTCTGGAGCTGGAGCTGGTCGACACCGCCGGCCTGCGCGAAGGTGGCGATGCGATCGAGCGCGAGGGCATGCGGCGCGCCCGCGAGGAGATGCGGCGGGCCGACCTGGCCATCGTGGTGCTCGATGCGCGCGACCCGGAGGCCGGCCGCCAGGCGATCGGCGATGCCGCCGCCCAGGCCACGCGCCAGCTGTGGGTACTCAACAAATGCGACCTGCTGCCGCAGTGGCCGCAGCCGCCGGACGCGGACAGCATCACGTTGTCCGCCGCCAGCGGACAGGGCCTGGAGCAGCTGCACGCGCGCCTGCGCCAGCTGGCCGGCGAGGGGGCCGGCGGCGAAGGCCAGCAGGGCGAATTCTCCGCGCGCCTGCGCCATGTGCAGGCCATCGTCCTGGCCGCCGCGCACCTGGACGATGCCGAGGCGCAACTGCGCCACGATCACCTGGAACTGGCGGCCGAGGAACTGCGCCTGGCGCACCAGGCGCTGGGCGAAATCACCGGCCGCATGACCGCCGACGACCTGCTCGGCCGGATCTTTTCGAGCTTCTGCATCGGCAAGTGA
PROTEIN sequence
Length: 451
MNDSARRDTIIAIASGAAAGGVGIVRLSGPLSAPIAGGLGCPALRPRHAHYARFRDADGEVIDDGIALYFPGPRSFTGEDVVELQGHGSPVVLRQLLERCIALGARQARAGEFSERAFLNGKLDLAQAEAIADLIAAGDVRAARAARRSLDGVFSRRVEDVAEQLVRLRIHVEAAIDFADEPLDTLGGAQVRAGVAQAREALARLCVDAERGRKLRDGLHAVLIGPPNAGKSSLLNALAGSERAIVTDIAGTTRDTLRETIRIDGLELELVDTAGLREGGDAIEREGMRRAREEMRRADLAIVVLDARDPEAGRQAIGDAAAQATRQLWVLNKCDLLPQWPQPPDADSITLSAASGQGLEQLHARLRQLAGEGAGGEGQQGEFSARLRHVQAIVLAAAHLDDAEAQLRHDHLELAAEELRLAHQALGEITGRMTADDLLGRIFSSFCIGK*