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SCNpilot_cont_500_bf_scaffold_4231_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1..321

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14. similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 106.0
  • Bit_score: 164
  • Evalue 1.00e-37
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 106.0
  • Bit_score: 163
  • Evalue 3.80e-38
tRNA dimethylallyltransferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L298_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 106.0
  • Bit_score: 164
  • Evalue 7.10e-38

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Taxonomy

Stenotrophomonas sp. SKA14 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATCGAACGCCGCTTCGACCTGATGCTGGAAGCCGGCTTTCTCGACGAGGTGCGACGCCTGCGCGCGCTGCCGTCGATGGCCGTGGTGCCGGCGCCGCTCGACCTGCCGGCGATCCGCGCGGTGGGTTATCGCCAGGCCTGGCAGTTCCTGGACGGGTGCGACAGCGCCGCGGGTTTCCGCGACAAGGCGATCTTCGCCACCCGCCAGTTGGCCAAGCGCCAACTGACCTGGCTGCGCGGCGAGCTGGACGCGCGCTGGTTCGATCCGGCCACCGATGCCGGCCGCCTGCAGGACGCGGTTTCCCTGTTCCTGGGGCGATGA
PROTEIN sequence
Length: 107
IERRFDLMLEAGFLDEVRRLRALPSMAVVPAPLDLPAIRAVGYRQAWQFLDGCDSAAGFRDKAIFATRQLAKRQLTWLRGELDARWFDPATDAGRLQDAVSLFLGR*