ggKbase home page

SCNpilot_cont_500_bf_scaffold_6001_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1853..2608

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000368838A similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 195.0
  • Bit_score: 348
  • Evalue 6.30e-93
  • rbh
Membrane protein {ECO:0000313|EMBL:AHY58212.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 195.0
  • Bit_score: 346
  • Evalue 2.60e-92
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 195.0
  • Bit_score: 343
  • Evalue 6.30e-92
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGCCCGGCGCATCGCCGCACCGCTACAATTGGCGGATGTCGCCCGAAGCTTCCGCCGTCCCCCACCGCCCCTCCCTGCAGCGCCTGTTCCTGACCGGATTGCTGACCCTGCTGCCGATCTGGCTGACCTGGGTGGTGATCAAGTTCGTGTTCGTGCTGCTGTCCGGCATCAGCAGCCCGCTGGTGGTGCCGCTGTCCGAACGCATCGCCGCCTCCTTCCCGCATTACCTGGGCTGGGTACGGGTGGAATGGATGCAGGACGTGTTCGCCCTGCTCGCCACGCTGCTGGTGATCCTGCTGGTGGGCGTGCTCAGCCGCCGCGTCATCGGCCAGCGCCTGCTGCGCTGGTTCGGCGCGGTGATCCGCCGCATCCCGCTGGCCAGCATCATCTACGACAGCGCCAAGAAGCTGCTGGACATCCTGCAGACCCAGCCGGGCAGCACCCAGCGCGTGGTGCTGATCGACTTCCCGCACCGCGAAATGAAATCGGTGGGCCTGGTGACCCGCGTCATCCGCGAACACGGTACCGGCCGCGAACTGGCCGCGGTGTACGTGCCGACCACGCCGAACCCGACCTCGGGCTATCTGGAAATCGTGCCGGTGGAGCTGCTGACCCCGACCGCGTGCCGTTCACCCGCGCCGGCGAGCGCTGAAACGCCGCCCGCAAGGGCAGAAACAGGGTGCGCCGGGCAGGCAATGGGGGTGACTGCCGCCTTTATCCGTTGCCGGTTGCTCTTCACTAGTGCCTGCCGCTGA
PROTEIN sequence
Length: 252
MPGASPHRYNWRMSPEASAVPHRPSLQRLFLTGLLTLLPIWLTWVVIKFVFVLLSGISSPLVVPLSERIAASFPHYLGWVRVEWMQDVFALLATLLVILLVGVLSRRVIGQRLLRWFGAVIRRIPLASIIYDSAKKLLDILQTQPGSTQRVVLIDFPHREMKSVGLVTRVIREHGTGRELAAVYVPTTPNPTSGYLEIVPVELLTPTACRSPAPASAETPPARAETGCAGQAMGVTAAFIRCRLLFTSACR*