ggKbase home page

SCNpilot_cont_500_bf_scaffold_11142_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2..511

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L2H1_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 169.0
  • Bit_score: 303
  • Evalue 1.20e-79
  • rbh
Membrane protein {ECO:0000313|EMBL:EZP43563.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 167.0
  • Bit_score: 315
  • Evalue 5.60e-83
hypothetical protein; K08984 putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 171.0
  • Bit_score: 300
  • Evalue 3.20e-79
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
TCGCTGACCGTGGTCGGGCTGGCCGCGCTGTGGTGGGTGGACCGGCGCTGGCCGCTGGGCGTCGGCGCCTTCGCCGCGGTCTGCGGATTCGTCGCGCTGCACTGCATCGGTGCGCGCTGGCTGTATTCCAACGTGCCGTACGAAGCCTGGCTGCAGGCGCTGACCGGCTGGTCGCCCGGCGCGGCCTTCGGCTGGCAGCGCAATCATTTCGATCGCCTGATCCACCTCCTGTATGGCGCCTGCTTCACCCCGGCGCTGGCGCAGCTGGCGCGCCATGCCTGGCCGGCGCTGCGTGGCGGCCAGGCGTTCGTGCTGGCGGTGATGATGGTCATGTGCTCCAGCCTGGTCTACGAATGGCTGGAATGGGGCATCGCCCTGGCGTTGTCGCCGGAAGCCGCCGAGGCCTACAACGGGCAGCAGGGCGATGTCTGGGACGCGCACGCGGACATGCTGCTGGCCACCATCGGCAGCCTGCTGGCATGGCCACTGGCACGGCGGGCACCCCAATGA
PROTEIN sequence
Length: 170
SLTVVGLAALWWVDRRWPLGVGAFAAVCGFVALHCIGARWLYSNVPYEAWLQALTGWSPGAAFGWQRNHFDRLIHLLYGACFTPALAQLARHAWPALRGGQAFVLAVMMVMCSSLVYEWLEWGIALALSPEAAEAYNGQQGDVWDAHADMLLATIGSLLAWPLARRAPQ*