ggKbase home page

SCNpilot_cont_500_bf_scaffold_8741_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1017..3872)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309B383 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 951.0
  • Bit_score: 1563
  • Evalue 0.0
  • rbh
Vitamin B12 transporter btuB {ECO:0000313|EMBL:EZP42970.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 954.0
  • Bit_score: 1488
  • Evalue 0.0
putative TonB dependent receptor protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 954.0
  • Bit_score: 1487
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2856
ATGTACCTGAAGTCGACCCCGCTTCGTTCCGCCATCGCGCTGGCCCTGGCCACCGCATGCAGCGCCCCCGCCTTGGCGCAGTCCGGCAATGACGGCACCACCACCCTGGACCGCGTCGAGATCACCGGCTCGCGCATCCGCCAGGCCAGCGTCGAGAGCGCCAAGCCGGTCATCGCGCTGAGCCGCGCCGAGATCGAGAAGAAGGGCTACGTCAACGTCGCCGACATCCTGCAGGATGTCACCGCCGCCGGCGCGCCGGCGCTGAGCCGCGCATCGGCACTGTCCTCGGCGCGCGACTACGGCGGCATGTTCGTCAGCCTGCGCAACCTGGGCCCCGAGCGCAGCCTGGTGCTGGTCGACGGCCGCCGCATGGGCGTGAGCGCCGGCGGCTACTCCGACGTGGGCTCGATCCCGTCGGCGATCGTCGAGCGCGTGGAAGTGCTGACCGACGGTGCATCGGCGCTGTACGGCTCGGACGCCATCGCCGGCGTGGTCAACATCATCACCCGCAAGAACTTCGACGGCGGCCAGGCCAATGCCTACGTCGGCCAGTACGGCGAAGGCGACGGCCAGAAGCGCGCCTACAGCGCCACCTGGGGCAAGACCTTCGAGCGCGGCTGGGTCACGCTCGGCGCCGAGAAGGTGAAGGAAGACCCGGTGCTGGGCGGTGCACGCGAGTTCACCGCCTATCCGAACGGCCCCTACCACCCCACCGATGGCCTCAACGGCACCACTGCATGGGGCTCGGTCACGGTCGATGGCAAGGTGCTCAGCGTCGGCCCCGCCGGCGACCCGTCGAAGGTGGAGGACTTCAAGCCGCTCGACCGTTCGGCCTACGCCAACACCAAGACCAACATGACGCTGCTGTCGGGCCTGGAGCGCCGCTCGGCCTTCGCCAACGGCGGCTTCCAGATCACCGACGACCTGCGCGTGGTCGCCGACGTGCTGTACAGCGAGCGCGAATCGGTCAAGCAGCTGGCGGGCTACCCCTACTCGGTGTCTTCGGCGCAGGCGGCGAGCGGCACCCGTGCGATGCTGTCCAAGGACAGCGCGTTCAACCACTGGGGCAAGGACGTGCTGTTCTCGCACCGCACCGAGGAATTCCCGCGCGCGACCAACAACAGCCTGACCACCAAGCGCGCCAGCGTGGGCCTGGAAGGCAGCTTCGAGACCGGCTCGCGCTTCTGGGACTGGAACGTGGGCTACATGTTCAACCGCAACGAGGGCGAGCGCCGCACGCTGCAGAGCATGTACCAGCCCAACGTCAACAAGGCGGTGGGCGCCTCCTTCATCGATGCCAACGGCGTGGCCCGCTGCGGCACCCCGGACAACGTGATCCAGGGCTGCGTGCCGTGGAACCCGCTGGCGCCGATGGGCAGCAACAGCCCCGGCTCGCTCAGCGGCGACCCGGCCGTGCGCGATTACCTGTTCCGCAGCTTCGTCGATGACATCCAGAGCACCACCAAGGTGGTCAGCGCCAACATCTCCGGCTCGCTGTTCAGCCTGCCGGCCGGCGACATCATGGCCGCGATGGGCGTGGAGCACCGCAGCGAGGAAGCCAGCTATACCCCGGACCTGATGGTGCAGAACGGCGAGATCGCCGGTACCAGCGGCCAGCCGACCCGCGGCGACTACACGCTGGACGAGGTCTACCTGGAACTGCAGGTGCCGCTGCTGGCCGACCTGCCGTTCGCACGCGAGCTGTCGCTGGACGTGGCCGGGCGCTATTCGGACTACGACAACTTCGGCGGCACCACCAACGGCAAGTTCGGCCTGAAGTGGAAGCCGGTCGACGACCTGCTGGTCCGCGCCACCTACGGCACCGGCTTCCGCGCGCCCACCGTGGATGACCTGTACGGCGGCACCGTGACCACCCGCGACCGCATCACCGACCCGTGCGACCGCTCGTTCGGCGCCGCCGCGCGCAATGCCGAAGTGGCCGCACGCTGCACCGCCGCCGGCCTGGGCGCCGGCTTCCGCCAGAAGACCGGCGACGGCGAACTGGCCAGCACCTCCGGCGTGCAGGCGGTGACCGACTTCACCTCCGGCTCCAACCCGGACCTGAAGCCCGAGACCGCCAAGACCTGGACGGTGGGCGTGGTCTACAGCCCGGACTTCGTCAGCGGCCTGGACCTGAGCCTGGACTGGTGGAAGATCCGCATCGACAACGTCATCGTCGGCGAATCGGCCACCGACATCCTCAACCAGTGCTATGTGCAGGGCATCGCCTCGGCATGCTCGCGCTTCACCCGCTACACCTCCGGCAGCAACAAGGGCCAGGTGAGCGGCATGAACCGCTCGCTCAACAACGCCGGCTACCAGGAAACCGCCGGCTACGACCTCGGCGTGCGCTACCGCCTGCCGGAACTGGCCATCGGCCGCTTCGCGGTCAGCTGGAACACGACCTACGTCGACTACCTGTCGCGCAAGAGCGACAACGTGGACAGCACCCCGGTCGAGGAATTCACCGGCTGGGGCGGCAACTTCCGCGTGCGCTCCAACCTCAACCTCGACTGGCAGTACGGCGACCTGGGCATCGGCTGGACCACGCGCTACTACTCGGGCATGAAGGAGAAGTGCTCGTACGACCTGGATGGCGGCCCGGAGTGCAACCTGCCGGACTTCCGTTCCCCGTACACCGACGTGCAGCCCAGCCGCAAGGTCGGCGCCAACACCTTCCATGACCTGCAGGTGCGCTACAGCCTGCCGTGGAACGGCACCGTGTCGCTGGGCGTGAACAACGTCTTCAAGCACGTCGGCCCGGTGATGTACAGCCAGCCCAACAGCAGCTTCACCTACTACGGCGGCTTCGACATCGGCCGCTTCATGTACATGAAGTACCAGCAGCGCTTCTGA
PROTEIN sequence
Length: 952
MYLKSTPLRSAIALALATACSAPALAQSGNDGTTTLDRVEITGSRIRQASVESAKPVIALSRAEIEKKGYVNVADILQDVTAAGAPALSRASALSSARDYGGMFVSLRNLGPERSLVLVDGRRMGVSAGGYSDVGSIPSAIVERVEVLTDGASALYGSDAIAGVVNIITRKNFDGGQANAYVGQYGEGDGQKRAYSATWGKTFERGWVTLGAEKVKEDPVLGGAREFTAYPNGPYHPTDGLNGTTAWGSVTVDGKVLSVGPAGDPSKVEDFKPLDRSAYANTKTNMTLLSGLERRSAFANGGFQITDDLRVVADVLYSERESVKQLAGYPYSVSSAQAASGTRAMLSKDSAFNHWGKDVLFSHRTEEFPRATNNSLTTKRASVGLEGSFETGSRFWDWNVGYMFNRNEGERRTLQSMYQPNVNKAVGASFIDANGVARCGTPDNVIQGCVPWNPLAPMGSNSPGSLSGDPAVRDYLFRSFVDDIQSTTKVVSANISGSLFSLPAGDIMAAMGVEHRSEEASYTPDLMVQNGEIAGTSGQPTRGDYTLDEVYLELQVPLLADLPFARELSLDVAGRYSDYDNFGGTTNGKFGLKWKPVDDLLVRATYGTGFRAPTVDDLYGGTVTTRDRITDPCDRSFGAAARNAEVAARCTAAGLGAGFRQKTGDGELASTSGVQAVTDFTSGSNPDLKPETAKTWTVGVVYSPDFVSGLDLSLDWWKIRIDNVIVGESATDILNQCYVQGIASACSRFTRYTSGSNKGQVSGMNRSLNNAGYQETAGYDLGVRYRLPELAIGRFAVSWNTTYVDYLSRKSDNVDSTPVEEFTGWGGNFRVRSNLNLDWQYGDLGIGWTTRYYSGMKEKCSYDLDGGPECNLPDFRSPYTDVQPSRKVGANTFHDLQVRYSLPWNGTVSLGVNNVFKHVGPVMYSQPNSSFTYYGGFDIGRFMYMKYQQRF*