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SCNpilot_cont_500_bf_scaffold_8775_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(5090..6433)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A9A92 similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 359.0
  • Bit_score: 245
  • Evalue 7.80e-62
Uncharacterized protein {ECO:0000313|EMBL:KFN51494.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 459.0
  • Bit_score: 250
  • Evalue 5.80e-63
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 352.0
  • Bit_score: 245
  • Evalue 3.20e-62

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Taxonomy

Arenimonas composti → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
GTGAAGCGACTCGCAGCTGGATTGCTGACCCTCGCCATCGCCGCCGGCCTGAACGCCCCCGTCCATGCCGCCCCCACCATCCGCCCGCTCCCCGGCAACGGCGAAGCCGCGGGTGAAATCACCTCGGCCACCGCACTCAACTACAGCGACGGCAGCCGCAGCCAGCTGTTCAGCCTGCAACTGGCGGCCGGCCAGGCGGTATCGCTGAAGCTGGACGGCCCGCTCAACGGCACGCTGGCGGTGTTCCACCGCGACATGCTGGTCGGCCGCACCGAATGCGGCTGCGGCGAAGGCGCCCAGCTCAGCGTGCGCGCCGACAAGGCCGGCCCATACCTGATCGCGGTCAGCGGCGCCGATGCCCGCGCGTTCGGCCCGTTCCACCTCACCGCCACGCCGATCGTCGCCTATGACGGCAAGCCGCTGGCGGCCGGCCAGCGCATCACCGACTGGCTGGTCGGCGAGCGCCAGACCTACACCCTGCAGGTCGACGCGCCCGGCCTGTACACCGTCTCGCTGGAATCGGACGCGTTCGATACCCGCCTGGAACTGAGCGGCAACGGCGTGACGCTGGAAGACGACGATGGCGGCAACGGCACCGACTCGCGGCTGGTGGCGCCGCTGCAGCCGGGACGCTACACGCTCACCGCCAACGCCTTCTCGCGCAACGGCGGTGCGTTCTACCTGGGCGTGGAACGGGCCGATTTCCCGGAAGGCCTGGTGTTCGAGGACGGCAGCGCGCTGCCGCTGGAAGGCCTGGCCAGCAGCTTCGTCGGCGCCGACCAGACCCGCAGCTTCGTGTTCTCCCTGCCGGAGCGCCGCCGCGTGCAGTTCGATGCCAGCAGCCGCGACATCGATCCGTTCCTGACCCTGCAGGGCGCCGATTTCACGCTCACCGACGATGATGGCGGCGGCGCGGTCAACGCGCGCCTGTCGCAGGTGCTGGACCCGGGCGAGTACAACGTCTCGGTGCGCTCGGTGAACGGCCGCGGCGGCATCTTCCAGCTGGCCACCAGCACCGCGCCGGCACCGGACGGCCCGACCCGCCCGGTGCTCGTCCCCGGCCGCGAGACCAGCGGCCAGCTGATCGCCGGCTCGCGCAGCCTGTACACGCTCGAGGTTCCGCGCAAGGGCCACTACGTCATCAGCATGACCGGCAGCAACGGCCTGGACGGCATGATCACCCTGATGCGCGACGGCGAGGAAGTCGCCTCGCAGGACGACAGCGACACCAGCCTGGATCCGCAGCTGGAGATCGAGCTGGACGCCGGCCGGTACGTACTGATGGCGCACAGCTTCGACCCGTATGCGGCGGGCGCCTATCGGCTGCTGGTCCGCCGCAGGTAA
PROTEIN sequence
Length: 448
VKRLAAGLLTLAIAAGLNAPVHAAPTIRPLPGNGEAAGEITSATALNYSDGSRSQLFSLQLAAGQAVSLKLDGPLNGTLAVFHRDMLVGRTECGCGEGAQLSVRADKAGPYLIAVSGADARAFGPFHLTATPIVAYDGKPLAAGQRITDWLVGERQTYTLQVDAPGLYTVSLESDAFDTRLELSGNGVTLEDDDGGNGTDSRLVAPLQPGRYTLTANAFSRNGGAFYLGVERADFPEGLVFEDGSALPLEGLASSFVGADQTRSFVFSLPERRRVQFDASSRDIDPFLTLQGADFTLTDDDGGGAVNARLSQVLDPGEYNVSVRSVNGRGGIFQLATSTAPAPDGPTRPVLVPGRETSGQLIAGSRSLYTLEVPRKGHYVISMTGSNGLDGMITLMRDGEEVASQDDSDTSLDPQLEIELDAGRYVLMAHSFDPYAAGAYRLLVRRR*