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SCNpilot_cont_500_bf_scaffold_10895_6

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 4235..5023

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 228.0
  • Bit_score: 379
  • Evalue 2.80e-102
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 255.0
  • Bit_score: 377
  • Evalue 4.10e-102
  • rbh
endonuclease III n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E00624 similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 256.0
  • Bit_score: 387
  • Evalue 9.70e-105
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACCCCGCCGCCAAAGCCGGCGACGCCCCGCGCCCGGGCCAAGGCGGGCGCCACGGCCCGGGCCGGTGCGGAGACCGCGGCAAAGACCAGGCGCCCACGCCCCGGGTCGGCATCCAGCCTGCCGGTCGCGCGCGCGTCCCGCGCCAGGCGCATGAACGGCGCGGAAGTACGCGAGATGTTCACGCGCCTGCGCGAACTGAATCCTCACCCGACCACCGAGCTGGAGTACCAAACGCCGTTCGAACTGCTGGTGGCGGTGACGCTGTCGGCGCAGGCCACCGACGTCGGCGTGAACAAAGCGACCCGCAGGCTGTTCCCGGTGGCCAATACCGCGCAGGCCATCCTCGCCCTCGGCGAAGACGGGCTGAAGCCCTACATCTCCACCATCGGCCTGTTCAACGCCAAGGCCAGGAACGTGATCGCCGCCTGCGCGATCCTGGTCGAGAAGCACGGCGGCGAAGTGCCCGCCGACCGCGCCGCGCTGGAAGCCCTGCCCGGGGTCGGCCGCAAGACCGCCAACGTGGTGCTCAACACCGCCTTCGGCGAACCGACCATGGCGGTGGACACCCACATCTTCCGTGTCTCCAACCGCACCGGGCTGGCGCCGGGCAAGGACGTGCGCGCGGTGGAGGATGGCCTGCTGAAGGTGATTCCGGGGGAGTTCCTGCAGGATGCGCATCATTGGTTGATCCTGCATGGCCGTTATGTGTGCAAAGCACGCAAACCGGATTGCCCGCAGTGCGTCATCCGCGACCTGTGCCATTACAAGGACAAGACCGTCGCCTGA
PROTEIN sequence
Length: 263
MTPPPKPATPRARAKAGATARAGAETAAKTRRPRPGSASSLPVARASRARRMNGAEVREMFTRLRELNPHPTTELEYQTPFELLVAVTLSAQATDVGVNKATRRLFPVANTAQAILALGEDGLKPYISTIGLFNAKARNVIAACAILVEKHGGEVPADRAALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVSNRTGLAPGKDVRAVEDGLLKVIPGEFLQDAHHWLILHGRYVCKARKPDCPQCVIRDLCHYKDKTVA*