ggKbase home page

SCNpilot_cont_500_bf_scaffold_16347_4

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2192..2947)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 251.0
  • Bit_score: 432
  • Evalue 3.50e-118
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 251.0
  • Bit_score: 431
  • Evalue 2.30e-118
  • rbh
Triosephosphate isomerase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TJ88_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 251.0
  • Bit_score: 432
  • Evalue 2.50e-118
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGCGCCGCACGATCGTCGCCGGTAACTGGAAGCTGCATGGCAGCCGTCAATTCGCCACCGAACTGGTGGGGCAGGTGGCCGCCGGCCTGCCGCTGCAGGGGGTCGAGCTGGTGATCCTGCCGCCGCTGCCCTACCTGGGCGACCTGGTCGAGGACTTCGAGGGCACCGCGCTGGCCTTCGGCTCGCAGGACGTCAGCAGCAACGAGAAGGGGGCCTACACCGGCGAGGTCTCGGCCGCCATGCTGGTGGACGTGGGGGCGAGGTACGGCCTGGTCGGCCATTCCGAGCGCCGCCAGTACCACCACGAAAGCAGCGAGCTGGTGGCCCGCAAGTTCGTGGCCGCGGTGCATGCCGGCCTGGTCCCGGTCTTGTGCGTCGGTGAGACGCTGGAGCAGCGCGAGGCCGGGCAGACCGAACAGGTCATCGCCGCGCAGCTGGCACCGGTGCTGGAGCTGGCCGGGGTCGATGCCTTCGCCGGGGCGGTGGTGGCGTATGAGCCGGTCTGGGCCATCGGCACCGGCCGCACGGCCAGTCCGGAGCAGGCGCAGGCCGTGCATGCCTTCATCCGTGGCGAAGTCGCCGGGCGCGATGCTAGAATCGCCGATTCGTTGCCGATCCTGTATGGCGGCAGCGTCAAGCCCGACAATGCTGCAGAGCTGTTCGCACAGCCTGACGTCGATGGCGGGCTGGTAGGCGGCGCTTCGCTGGTGGCGGCAGATTTCCTGGCCATCGCGAGGGCGGCAGCCGGTCGCTAA
PROTEIN sequence
Length: 252
MRRTIVAGNWKLHGSRQFATELVGQVAAGLPLQGVELVILPPLPYLGDLVEDFEGTALAFGSQDVSSNEKGAYTGEVSAAMLVDVGARYGLVGHSERRQYHHESSELVARKFVAAVHAGLVPVLCVGETLEQREAGQTEQVIAAQLAPVLELAGVDAFAGAVVAYEPVWAIGTGRTASPEQAQAVHAFIRGEVAGRDARIADSLPILYGGSVKPDNAAELFAQPDVDGGLVGGASLVAADFLAIARAAAGR*