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SCNpilot_cont_500_bf_scaffold_19268_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3..1577

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase/resolvase recombinase protein phage-related integrase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RNF6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 25.6
  • Coverage: 324.0
  • Bit_score: 92
  • Evalue 1.70e-15
phage integrase site specific recombinase similarity KEGG
DB: KEGG
  • Identity: 24.9
  • Coverage: 370.0
  • Bit_score: 122
  • Evalue 4.80e-25
Strain MEJ076 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02994.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.3
  • Coverage: 491.0
  • Bit_score: 98
  • Evalue 2.50e-17

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
GCGGTGTCCAATCAGCCCGTGGAAGTCTGGGGACATGGCTACGACGACGATGGTGTGCTTCAACCTCAAATCATTGAGGCGCTTAACGACTTCGCCGATGACCATGCCCACCTCACCAGAGACGGCATCCGTGCTGCCTTGCTTGCCGAAAAGAACGCGTTGCTAGTCGAGCAAGTCCACTCGGACCAGCCCGGTCTGCGCAATGGCGGTGGGCATGGCAATTACTACGATGTCGTTCTTACCTCGTCCATCACATGCAACCTAAGCGAATTGAAGGTCGCCAGTACCTACGCACGCCAAACGGCCATCAAGGCAACGCCTGCGGCTGCCTCGTCACCTGTTGCCACAGACTGTGAGCCGATTGCACTGAGCGAAGCAAAGGAGACGTGGGTCAAGGAGAACCGCAGCGAGAATGGTGGCACTTGGAAGAAGGCCACCGTCAGCAACTACGACTCCTATGTCCAGCAATTCATCACCCTTGTTGGCGACAAGCTCACTACCGAACTACAAGCAAGGGATTTCGCCAATTATGAAAGGATGATGCGGACCCTTCCTGCCGATTGGTATGCCACCCACAAGAGGACAGGGCTATCCCCAGCACAGATTGCGATAAGAAAATCCGACACCAAGCTCTCGCCGAAAACTCTGAAAGACAAGGGAAGCGCCATTTCCCTCTTCTTTTCCTATCTGGAGCAGAAGGGGTTCTGGCATGGTCGCTACGGGGCTGCATTGTTCAGTACCGTGAAAGCGCCCAAGGCAAAGAAGCCACGACACGTCTTCTCCAATGACGAACTGAAGATACTCTACGCAGGAGCCGGGATTGAAACCTTTAGGAAGGCGAAGTTTCCGCTATACGTATGGGGAAGCATCCTCCTCCTATTCACTGGTGCCCGGCCAGCCGAAGTCAGCCAGTTGCAGTACCAAGATGTTACCCAAGACGAGAACGGGACTTGGTATCTCCGCCTTATGCCGAATGACGAAGGGGAAGAAGGGATTGCGGATGACGATGAGCCGGAAGCACAGAAGCAGTTCAAAACAACCTCTAGCATTCGCTCAATCCCTCTCCACCCCCAAGTCATCCAACTCGGCTTCCTGAGCTTTATCCAGCGATTCAAGTCCGGGGAGAAGCTATTCCCTGAAGCCTTCCGCCACGACCAGAAGGTAAGCCGGGAAATCGGCGACTGGTTCAACGGCAAGCTATTGAAGAATGCGGAATTGAAGAAAGATGGGGTCGTCCTGTACAGCCTTCGTCATACCGTAATCAATCGCTTCAAGGCAGATGCCACCATGGACCACTACGCCTGTGCCTACACAGGCCACAGCACCGCAGACGACAAGGCAATCTCGAACCGAATCTATCGGGACAGGTACGGCCGCGCCTTCACGCTAACCCTTCTAGCCGAGAAGCTGCATCCCTTGCTCGACTTCGATATCGACTGGACTCCCTTGAAGGGGGTCATAGACGAAAAGGGCTGGGCAAGCGCCACGCTCGCCCAGCCCTCGTCTAAGCCGAGCAAGAAAGTACCTAGAAAAGCGACTCCTCGCAGGACCAAACTTGTAGCGTCGAAAACTTAA
PROTEIN sequence
Length: 525
AVSNQPVEVWGHGYDDDGVLQPQIIEALNDFADDHAHLTRDGIRAALLAEKNALLVEQVHSDQPGLRNGGGHGNYYDVVLTSSITCNLSELKVASTYARQTAIKATPAAASSPVATDCEPIALSEAKETWVKENRSENGGTWKKATVSNYDSYVQQFITLVGDKLTTELQARDFANYERMMRTLPADWYATHKRTGLSPAQIAIRKSDTKLSPKTLKDKGSAISLFFSYLEQKGFWHGRYGAALFSTVKAPKAKKPRHVFSNDELKILYAGAGIETFRKAKFPLYVWGSILLLFTGARPAEVSQLQYQDVTQDENGTWYLRLMPNDEGEEGIADDDEPEAQKQFKTTSSIRSIPLHPQVIQLGFLSFIQRFKSGEKLFPEAFRHDQKVSREIGDWFNGKLLKNAELKKDGVVLYSLRHTVINRFKADATMDHYACAYTGHSTADDKAISNRIYRDRYGRAFTLTLLAEKLHPLLDFDIDWTPLKGVIDEKGWASATLAQPSSKPSKKVPRKATPRRTKLVASKT*