ggKbase home page

SCNpilot_cont_500_bf_scaffold_19284_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 3..1139

Top 3 Functional Annotations

Value Algorithm Source
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 424.0
  • Bit_score: 398
  • Evalue 3.30e-108
DNA polymerase III subunit gamma/tau n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L142_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 424.0
  • Bit_score: 404
  • Evalue 1.10e-109
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AHY60061.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 404.0
  • Bit_score: 416
  • Evalue 5.20e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
GCGGCGGGCGATGGCGCGCGCCTGCTGCAGGTCGTGGCCACCCTGGCCGATTTCTCGCCGGACTGGAGTGGCGTGCTCGACGCGCTGGCCGAGGCCCTGCACCGCATCCAGGTGCAGCAGCTGGTGCCGGGCGCGGCGGCGCCTGGCGACGGTGTCGACGCGCTGGCGTTCGCCTCGCGCCTGCGTCCGGAAGTGGTGCAGCTGTGGTACCAGATGGCGCTGGGCGGCCGTCGCGACCTGCATCTGGCGCCCAGCCCGCGCGCCGGTTTCGAGATGACCGTGCTGCGCATGCTGGCGTTCCGCCCGGCGGGTGGGGTGCCGGCGGTACCGGAAGGCGAAGGTCCTGGGACGGGCGCGGTGTCGTCGTCGGCTGGCGGTTCCGCTCCTGCCGTGAGCGCGGCTGCCGTCGCTGCACCGGCGCAGCCGGTGGCGACTGCGCCGGTAGCCGAACCCGTTTCCGCCGACGCACCCCCGAAGCGGGAAGATGTCGTGCCGCTGGCGCCGCGCGCGCCGCAGGCCGATGCGACGTCGCTTTCCCCGGCGCCGGCAGCAGAGCCCGTGCAGGCGCGCGAGGACGACGACCTGCCGCCATGGATGGAGGAGACCGCTGCCGCGCAGGCGCACCACGAGGTGGCCGACGCCATGCCGCCGGCACCCCGCCAGGCGCCGTCATCGCCGTTCCGCGCCGAAGGCATCGCCATCACACCGCCGCCGCCAGCCACGACCGCGGCCGGCGCGGCGCCACGCGCGCTGGAGAACGCCGAACAGTGGCTGGACCTGGTCGCCGCCAGCGGCCTGTCCGGGCCCTCGCGCGAGCTGGCCGCCAACGCCGCTTTCGTCGGTTACCGCAACGGCGTGCTGCGGCTGGCGCTGCTGCCGGGTTTCGAATACCTGCAGTCCGAGCGCTCGCTGGGCGCGCTGGCGCAGACCCTGGCGCAGGCGCTGGGCAGTGCGCCGAAGATCGTGATCGAGACCGGTAACGCGCAGGCCGAAACCCTGCACGAGCGCGCCGACCGCCAGCGCGGCGAGCGACAGAATGCGGCCGAAGCCGTTTTCATGGCCGACCCCCAGGTGCAGCACCTGCTTGCGCAGGGTGCCCGGGTCGTGCCCGATTCCATCCGTCCCTTTGAAGAGTAG
PROTEIN sequence
Length: 379
AAGDGARLLQVVATLADFSPDWSGVLDALAEALHRIQVQQLVPGAAAPGDGVDALAFASRLRPEVVQLWYQMALGGRRDLHLAPSPRAGFEMTVLRMLAFRPAGGVPAVPEGEGPGTGAVSSSAGGSAPAVSAAAVAAPAQPVATAPVAEPVSADAPPKREDVVPLAPRAPQADATSLSPAPAAEPVQAREDDDLPPWMEETAAAQAHHEVADAMPPAPRQAPSSPFRAEGIAITPPPPATTAAGAAPRALENAEQWLDLVAASGLSGPSRELAANAAFVGYRNGVLRLALLPGFEYLQSERSLGALAQTLAQALGSAPKIVIETGNAQAETLHERADRQRGERQNAAEAVFMADPQVQHLLAQGARVVPDSIRPFEE*