ggKbase home page

SCNpilot_cont_500_bf_scaffold_19042_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(156..563)

Top 3 Functional Annotations

Value Algorithm Source
ribosome-associated heat shock protein Hsp15 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031B5AC6 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 135.0
  • Bit_score: 208
  • Evalue 5.40e-51
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 137.0
  • Bit_score: 205
  • Evalue 5.00e-50
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15 similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 124.0
  • Bit_score: 203
  • Evalue 5.50e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGACTGAAACGCAACACGGGCCGGCGGCGATCCGCCTGGATGTCTGGCTGTGGGCCGCGCGCTTCTTCAGGACCCGCAGCCTGGCCAAGCATGCGGTGGAGACCGGCAAGGTCGAGATCGGCGGGCAGCGCCCCAAATCCTCGCGCGCGGTCCGCATCGGCGATGCGCTGCGCGTGCAGCGCGGCGAGGAGATCTTCGAGATCGGCGTGCGCGGCCTCAGCGACACGCGCGGGCCGGCCGGGGTGGCGCAGGCGCTGTACGAGGAGACCGAGGCCTCGCGCAAGGCGCGCGAGGAACAACGACTGCAGCGCGCCGCCGCGCGTGACGGCTACCTGCCGCCCGAACACAAGCCGGACAAGCGCGCGCGGCGGCTGATCCGCGCGCTGGGCGACATCGACGCGCTGTAG
PROTEIN sequence
Length: 136
MTETQHGPAAIRLDVWLWAARFFRTRSLAKHAVETGKVEIGGQRPKSSRAVRIGDALRVQRGEEIFEIGVRGLSDTRGPAGVAQALYEETEASRKAREEQRLQRAAARDGYLPPEHKPDKRARRLIRALGDIDAL*