ggKbase home page

SCNpilot_cont_500_bf_scaffold_19042_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 921..2417

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Pseudomonas geniculata RepID=UPI00029A4BEF similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 493.0
  • Bit_score: 805
  • Evalue 2.20e-230
  • rbh
Stenotrophomonas maltophilia strain ZBG7B contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87191.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 494.0
  • Bit_score: 810
  • Evalue 1.20e-231
Na-driven multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 481.0
  • Bit_score: 803
  • Evalue 4.40e-230
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGACCGCCCCCGCCCCTGCCTCCCGCTCGCTGACCGAAGGCCCGATCGGGCGCAACCTGCTGCTGTTCGCCCTGCCCATCCTGGCCGGCAACATCGCCCAGTCGCTCAACGGCTCGGTCAACGCGATCTGGGTCGGCAAGTTCCTCGGCGAGGCGGCGCTGACCGCCACGGCCAACGCCAACAACATCATGTTCTTCCTGATCGGCTCGGTGTTCGGCATCGGCATGGCCGCCACCATCCTGATCGGCCAGGCCATGGGCGCGCGCGACGTGGCCCAGGCGCGACGGGTGATGGGTACCAGCGCCACCTTTTTCATCGGCATCTCGGTGCTGATCGCCATCGCCGGCTGGTTCATGGCGCACCCGCTGCTGGCGGCGATGGGCACGCCGGCCGTTTCGCTGCCGCTGGCCGAGACCTACCTGCGCATCATCTTCCTGGCCACGCCCACGCTGTACGCCTTCGCCTTCCTCGGCGCGGCGCTGCGCGGTGCCGGCGATTCGCGCACGCCGTTCCGCTTCCTGCTGTTGTCGGTGGCGCTGGACATCGTGCTCAACCCACTGCTGATCTTCGGCATCGGCCCGTTCCCGCAGCTGGGCATCGCCGGCGCGGCCTGGGCCACGCTGCTGGCGCAGTCGCTGTCGCTGCTCGGCCTGCTGGCCTGCATGCGCCAGCGCGGCCACGTGCTGTGGCTCGGGCGCAAGGACATGGCGCTGTTCCGCATCGACCTGGCGATCCTGCGGGCGCTGGTGGTCAAGGGCGTGCCGATGGGCCTGCAGATGGTGCTGATCTCGCTGTCGATGATCATGCTGATGACCATGGTCAACGACTACGGCACCGATACCGCCGCGGCCTATGGCGCCTCGCTGCAGCTGTGGACCTACGTGCAGATGCCGGCGATGGCGATCGGCGCGGCATGCTCGTCGATGGCCGCGCAGAACGTGGGCGCGGGCCACTGGAGCCGGGTGCGCGGCACCGCGCGCAAGGGCGTGCTGTTCAACTTCCTGCTTACCGGGGTGCTGATCCTGCCGCTGATCCTGCTGGACCGGCACTCGCTGGCGCTGTTCCTGCCCGACGGCAGCCAGGCGCTGGCGGTGGCGCGCCACCTGAACCACATCGCGGTGTGGTCGTTCCTGTTCTTCGGCGTGAGCTTCGTGATTTCCGGCGTGGTGCGTTCCACCGGCGCGGTGATCGCGCCGCTGCTGATCCTGGCCGCTGCGCTGTGGGGCGTGCGCGTGCCGTTCGCCGAGTGGCTGCAACCGTACTGGGGCGCGGACGCGATCTGGTGGAGCTTCCCGGTCAGCTCGCTGGTGTCGATGCTGCTGTCGCTGGCGTACTACCGCTGGGGCGGCTGGCGCAGGGCCAGGATGATGTCGCCGCCGGCGCATGCCGGGGAGCTGGCGACGCCGGCCGAAGTGCCGGCCTGCCCGCCGTCGCCGGTGGCCGAGGCCGAGGCCGAGGCCGGGGCCGATGTCGATGCGCAGCCCGGCAGGTCCTGA
PROTEIN sequence
Length: 499
MTAPAPASRSLTEGPIGRNLLLFALPILAGNIAQSLNGSVNAIWVGKFLGEAALTATANANNIMFFLIGSVFGIGMAATILIGQAMGARDVAQARRVMGTSATFFIGISVLIAIAGWFMAHPLLAAMGTPAVSLPLAETYLRIIFLATPTLYAFAFLGAALRGAGDSRTPFRFLLLSVALDIVLNPLLIFGIGPFPQLGIAGAAWATLLAQSLSLLGLLACMRQRGHVLWLGRKDMALFRIDLAILRALVVKGVPMGLQMVLISLSMIMLMTMVNDYGTDTAAAYGASLQLWTYVQMPAMAIGAACSSMAAQNVGAGHWSRVRGTARKGVLFNFLLTGVLILPLILLDRHSLALFLPDGSQALAVARHLNHIAVWSFLFFGVSFVISGVVRSTGAVIAPLLILAAALWGVRVPFAEWLQPYWGADAIWWSFPVSSLVSMLLSLAYYRWGGWRRARMMSPPAHAGELATPAEVPACPPSPVAEAEAEAGADVDAQPGRS*