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SCNpilot_cont_500_bf_scaffold_21637_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1376..1675

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=22 Tax=Xanthomonas RepID=IHFA_XANAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 9.20e-48
ihfA, hid; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 2.90e-48
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 1.30e-47

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Taxonomy

Xanthomonas axonopodis → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCATTGACCAAGGCGGAGATGGCCGACCGGTTGTTCGACGAGGTCGGCTTGAACAAGCGCGAGGCCAAGGAGTTCGTCGATGCGTTCTTCGACGTGCTGCGCGATGCATTGGAACAGGGACGTCAGGTGAAGCTGTCCGGCTTCGGCAATTTCGACCTGCGGCGCAAGAACCAGCGCCCGGGCCGCAATCCCAAGACCGGGGAGGAGATTCCGATTTCCGCCCGCACGGTGGTCACCTTCCGTCCGGGCCAGAAGCTCAAGGAGCGGGTGGAGGCATATGCTGGATCCGGGCAGTAA
PROTEIN sequence
Length: 100
MALTKAEMADRLFDEVGLNKREAKEFVDAFFDVLRDALEQGRQVKLSGFGNFDLRRKNQRPGRNPKTGEEIPISARTVVTFRPGQKLKERVEAYAGSGQ*