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SCNpilot_cont_500_bf_scaffold_26062_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 1174..2193

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 338.0
  • Bit_score: 534
  • Evalue 1.50e-148
ligA; NAD-dependent DNA ligase LigA; K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 332.0
  • Bit_score: 520
  • Evalue 3.90e-145
NAD-dependent DNA ligase LigA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DB79C0 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 340.0
  • Bit_score: 535
  • Evalue 4.90e-149

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACTTCCGAAGCCACCGCCCGCCGCCGCATCGCCGAACTCCGCCAGCAGCTGGCCACGGCCGCGCAGGCCTACCACGAGCACGACGAGCAGCTGATTCCCGATGCCGATTACGACCGGCTGCTGCGCGAACTGGAAGCGCTGGAGGCCGCCCATCCGCAGCTGGATAGCGACGATTCCCCGACCCACCAGATCGGCGGCAGGCCGTCGTCGCGGTTTCCCGAGGTGGTGCACGCGATGCCGATGCTGTCGCTGGGCAATGCCTTCAGCGACGAGGAAGTGCGCGACTTCGTGCGCCGCATCGACGAGCGCCTGCAGCGCCGCACGCTGGTGTTTTCGGCCGAGCCCAAGCTTGACGGGCTGGCGATCAGCCTGCGCTACGAGGACGGCGTGTTCGTGCAGGGCGCGACCCGCGGCGATGGCAGCCGTGGCGAGGATGTCACCGCCAATCTGCGCCAGATCAAGGTGATCCCGGCCCGGCTCGAAGGCGCGGGCTGGCCGGCGGTGCTGGAAGTGCGTGGCGAGGTGTACATGCCGCGCGCCGATTTCGAGAAGTACAACGAGCAGGCGCGCCTGCACGGCGGCAAGGTGCTGGCCAACCCGCGCAACGGCGCCGCCGGCTCGCTGCGCCAGCTCGACCCGAAGGTCAGCGCGCAGCGTCCGCTGAGCTTCTACGCCTATGGCACCGGCGAGGTCGACGGCGGCCAGCTGCCGCCCACCCATTCGGCGACGCTGGCACGGCTGGCGCAGTGGGGGTTCCCGGTGAGCGAACTGTGCCGGGTGGTCGAGGGTGTCGATGGCCTGCTGGACTATTACCGCGACATCGGCGCGCGCCGCGACGGGCTGGCGTTCGACATCGACGGCGTGGTCTACAAGCTCGACGACCGCGACGGCCAGCGCGAGATGGGCTTCGTCGCCCGCGCGCCGCGCTGGGCCATCGCCCACAAGTTCCCGGCGCAGGAGCAGACCACCACGGTCGAGGCGATCGAGATCCAGATCGGCCGCACCGGCGCCGCCACG
PROTEIN sequence
Length: 340
MTSEATARRRIAELRQQLATAAQAYHEHDEQLIPDADYDRLLRELEALEAAHPQLDSDDSPTHQIGGRPSSRFPEVVHAMPMLSLGNAFSDEEVRDFVRRIDERLQRRTLVFSAEPKLDGLAISLRYEDGVFVQGATRGDGSRGEDVTANLRQIKVIPARLEGAGWPAVLEVRGEVYMPRADFEKYNEQARLHGGKVLANPRNGAAGSLRQLDPKVSAQRPLSFYAYGTGEVDGGQLPPTHSATLARLAQWGFPVSELCRVVEGVDGLLDYYRDIGARRDGLAFDIDGVVYKLDDRDGQREMGFVARAPRWAIAHKFPAQEQTTTVEAIEIQIGRTGAAT