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SCNpilot_cont_500_bf_scaffold_25100_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(1806..2081)

Top 3 Functional Annotations

Value Algorithm Source
AlpA family transcriptional regulator n=1 Tax=Pseudomonas geniculata RepID=UPI00029A67A1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 65.0
  • Bit_score: 73
  • Evalue 1.40e-10
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 65.0
  • Bit_score: 72
  • Evalue 5.80e-11
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACF52230.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 65.0
  • Bit_score: 72
  • Evalue 2.60e-10

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GTGAGCGCGGCTGAAAAACTGGAAGAGCTACTGTCGATTGATCGCGTGTGCGAGCTGACCGGGGTCAGTCGGGCCTACATCTATATCCGCATCGGGGAGAAGACCTTCCCCAGGCAGATCAAGGTCGGCAAAAGATCGCTCTGGCTGATGAGCGAGGTGCAGGCATGGATCGCTGCTGAGGTTTGCGCATTTCGAGAAAACGAAACGGGCACCAAACGGGCACCAGCGAATTCTGATGGCTGCAATGAGATGGCGGAAACGGAGCCAACTCACTGA
PROTEIN sequence
Length: 92
VSAAEKLEELLSIDRVCELTGVSRAYIYIRIGEKTFPRQIKVGKRSLWLMSEVQAWIAAEVCAFRENETGTKRAPANSDGCNEMAETEPTH*