ggKbase home page

SCNpilot_cont_500_bf_scaffold_34289_2

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(228..1772)

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 514.0
  • Bit_score: 539
  • Evalue 3.90e-150
  • rbh
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 514.0
  • Bit_score: 539
  • Evalue 1.20e-150
  • rbh
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 514.0
  • Bit_score: 539
  • Evalue 5.50e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1545
ATGCGCGAACAGGTCGAGCAGCGCCTGCAGCAGCAGGCAGACGCCGTCGCGCCGGTGGCGCCGGCCTACGACCCGCTGGAAAACACCGTGGTCAGCATCAGCATGTTCAACGCCGACGTCGGCCAGCTGCTGTGGGCGCTGGCCGACGAGCTGAAGATGAACCTGATCGTCGACCCGCAGGTGCTGGAGCAGCGCCAGCGCACCAGCCTGCACCTGCGCAACGTCAGCGCACGCGAGGTCTACAACCACATCCTCGACGCGTTCGACCTGCACGGCGAGATCCGCGGCGGCGCGCTGGTGGTGGGGCAGATGCGCGAACGCATCTTCAACGTCGACCTGCTCAACTCCAGCACCTCCTTCGACCTGTCCACCGGCGGCGACGTGTTCGGTGCCGGCATCCAGAGTGCCGGCGGCGGCGGCCAGTCGCTGCGCGGCACGCTCACCATGAGCGGCAGCGTCGGCAAGGACAACGACCCCTACAAGCAGCTGGACGCCGCGATCAAGGTGATCCTGGGCAGCGACGAACAGGCCACCACCGCGCGTGGCCCGGATGCGCCGCCGGCGCCGGAAAAGAGCCGCTACAGCCTGGATCCCAGCTCCGGCACGCTGTTCGTCCGCGCCCGCCCGTCGCAGATCCGCGCGGTGGAGGAGCTGGTCGGCCACACCACCAGCAAGATGCGCCGCCAGGTCCTGGTCGAAGCGCAGATCCTGGACGTGTCGCTCAACGACAACTTCCAGTACGGCGTGGACTGGAACCTGCTGCGCAACCGCGTGGCCGGCATCTACGGCGACAGCCCGGCCACCATCGCGCCGCTGCCCGGCACGCCCGCCAATCCCGACCTCGGCATCCCGGAAAACCCCAACCTGCTGCCCTACCAGCGCTATGGCCGCTATGGCGACCAGGCCCGCAACATCATCTTCCCCAACCAGACGCTGGGCTCGGTGGCCGGGCGCGGGCTGGGCATCAGCTACCTGACGGACACCTTCTCGGCCGCGCTCAACGCGCTGCGCACCTTCGGCAACGTCAAGGTGCTGTCCAACCCCAGCGTGCGCGTGCGCAACGGCAGCCCGGCCTACCTGAGCGTGGGCTCCAACATCCGCTACGTCACCAAGTCCACCAGCAACTTCTCCAACACCGGCGGCGGCAGCGCCTACAACCAGTCCACCGACATCCAGACCGATTCGCTGTTCTCCGGCGTGGTGATCGGCGTGGCCCCGGTCGTGCACGACAACGGCGGCGTCGAACTGCTGGTGCACCCGATGCAGACCGAAGTGGTCCCCGGCAGCCTGGAACTGCAGAAGTTCCCCAACGGCAACGCCGTCACCCTGCCGGTGGTCAACGTCAAGGGCATCACCACCACGCTCAACCTGCGCGATGGCGACACCGTGCTGCTCGGCGGCCTGATCGACCAGAAGGCCAACCTCAACGACAGCGGCATCCCCGGCCTGTCCGACGTGCCGGCCTTCGGCAAGCTGTTCGGCTCGCGCGCCAAGCAGCAGAGCACCCGCGAACTGGTGCTGGTGCTGCGGGTGAAGGTGATATGA
PROTEIN sequence
Length: 515
MREQVEQRLQQQADAVAPVAPAYDPLENTVVSISMFNADVGQLLWALADELKMNLIVDPQVLEQRQRTSLHLRNVSAREVYNHILDAFDLHGEIRGGALVVGQMRERIFNVDLLNSSTSFDLSTGGDVFGAGIQSAGGGGQSLRGTLTMSGSVGKDNDPYKQLDAAIKVILGSDEQATTARGPDAPPAPEKSRYSLDPSSGTLFVRARPSQIRAVEELVGHTTSKMRRQVLVEAQILDVSLNDNFQYGVDWNLLRNRVAGIYGDSPATIAPLPGTPANPDLGIPENPNLLPYQRYGRYGDQARNIIFPNQTLGSVAGRGLGISYLTDTFSAALNALRTFGNVKVLSNPSVRVRNGSPAYLSVGSNIRYVTKSTSNFSNTGGGSAYNQSTDIQTDSLFSGVVIGVAPVVHDNGGVELLVHPMQTEVVPGSLELQKFPNGNAVTLPVVNVKGITTTLNLRDGDTVLLGGLIDQKANLNDSGIPGLSDVPAFGKLFGSRAKQQSTRELVLVLRVKVI*