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SCNpilot_cont_500_bf_scaffold_57763_1

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

partial RP 32 / 55 MC: 2 BSCG 34 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: 2..1063

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MP29_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 358.0
  • Bit_score: 248
  • Evalue 9.50e-63
General secretion pathway protein A family protein {ECO:0000313|EMBL:KDD62290.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 358.0
  • Bit_score: 251
  • Evalue 2.00e-63
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 358.0
  • Bit_score: 248
  • Evalue 3.00e-63

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
GTCACCTGCGTGCTGATGATCGACGACGCGCAGAACCTGACCCTGGAAAGCCTGGAGCTGCTGCGCCTGCTCACCAACCTGGAAACCGGCCAGGAAAAGCTGCTGCAGATCGTCCTGGCCGGGCAGCCGGAACTGCGCGCGAACCTGGAGCAGCCCGGCATCCGCCAGCTGACCAGCCGCATCTGCAAGCACGTGCAGCTCGACGTCCTGGCCGCCGACGAAGTGCAGCGCTACGTGCACTACCGCCTGGATGCGGCCGGCAACCCCAGCCCCGGCATCCGCCTGCGCGCCGATGCCGCGCAGGCGCTGCACCGCGCCAGCGGCGGCAACCCGCGGCGCATCCACCAGATCATGGACCGCTGCCTGTACGGCCTGTATGGCTTGCCGGCGCATGCGCGGGTGATCGATCCGGCACTGGTGCGCACCGCCGCCGCCGAGGCCGGCGCCCGCCCCCTGGCCCGCCGCCTGAAGCGTGCAAGGCACTCGCTTGCGACCGCCGCCTCGCTCACCGGGGTGCTCGCCGCCACCGTGCTTTTCCTGGCCCTGCGCGGCGCCGACTCGCGCGCCGAGGACACGCCGCCGGTGCCCGCGCCCGTGCCGGCGCAGGCCAGCGCCCCGTCCACCCGCGCCGATGACGCCGACTGGAACGCCTGCCTGCGCCGCCTCGGCCAGGCCGGCGTGCAGGTGCAGGCGGTCACCGCTACCTGGCTGGCGCGGCTGCCCACGCGCGACGGCCTGTGCCTGCGCCAGCTGGCCGAGGGCTGGCAGGCGGGATGGCGCACGCGGCTGCGCGCGGAGGATTTCCTCGCCGCGCAGGACCAGCATGCGCGCGTGCGCGCGGTGCAGGCGCTGCTGCAGGCCGAAGGCCTGTACGCCGGCACCCTCGACGGCCTGTACGGGCCGCGGATGCGCGCGGCCATCGCGCACTTCCAGCAACGCAGCGGGCTGCCGCCCAGCGGCGCGCCCGACCCGGCGACCCTGTTCCTGTTCGACACCCTGCTGGCGGCCCCCGCCGCCGCCTCGTCCACTTCCCCGGAAACGCAACACCATGGCAACGGTTGA
PROTEIN sequence
Length: 354
VTCVLMIDDAQNLTLESLELLRLLTNLETGQEKLLQIVLAGQPELRANLEQPGIRQLTSRICKHVQLDVLAADEVQRYVHYRLDAAGNPSPGIRLRADAAQALHRASGGNPRRIHQIMDRCLYGLYGLPAHARVIDPALVRTAAAEAGARPLARRLKRARHSLATAASLTGVLAATVLFLALRGADSRAEDTPPVPAPVPAQASAPSTRADDADWNACLRRLGQAGVQVQAVTATWLARLPTRDGLCLRQLAEGWQAGWRTRLRAEDFLAAQDQHARVRAVQALLQAEGLYAGTLDGLYGPRMRAAIAHFQQRSGLPPSGAPDPATLFLFDTLLAAPAAASSTSPETQHHGNG*