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SCNpilot_cont_500_bf_scaffold_3301_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(5837..7222)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP38_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 463.0
  • Bit_score: 710
  • Evalue 1.50e-201
two-component response regulator protein similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 463.0
  • Bit_score: 710
  • Evalue 4.70e-202
Fis family transcriptional regulator {ECO:0000313|EMBL:KEA08339.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 463.0
  • Bit_score: 710
  • Evalue 1.60e-201

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGACGCAGGATCGGAATGTCCACGCCTTGCCGGGTCAGGCCGAATTCGGGCCGTGGCTTGCCCAGGCGTCGATCCTCGTCGTCGACGACGAACCGGGCATCTGCAATTTCCTGGTCAAGACGCTGCGTCCGCGTTGCCGGCTGATCGAGGTGGCCAGCGATGCCGCGCAGGCCTCGCGGAAAGTCGACGAGCAGAATTTCGACGTCGTCATCATGGACAACATCATGCCTGGCAAGACCGGGCTCGAATGGCTGGCGGAACAGCGCGCGATCGGCCTGTTTTCCGATGTCATCCTGATGACCGCCTATGCCGATCTCGACACGGCGATCGATGCGCTGCGCGTCGGGGTGGTCGATTTCATCCTCAAGCCGTTCCGGTCCAACCAGTTGCTGAACGCCATCGCCCGCTGTCTCGACCGCAAGCGGCTGCAGCGCGAAAACGATGTGTTGCGGCACGAGATGACCGCGCCACAGCACCAGACGCTCCTGCGCAACCGGCTGATCGGCGCCTCGAAAGCCATCGCGCATGTGCGCGAGACGATTGCCCGCGTCGCGCCCTTGCCGACCTCGGTGTTGCTCACCGGGCAATCGGGCACCGGCAAGGAGGTCGCTGCCCGCTCGCTGCATCTTCTCTCGGACCGGGCGGACAAGCTGTTCGTCCCGATCAATTGCGGGGCCATCCCGACTGATATGATCGAGAGCGAATTGTTCGGCCATGTCAAGGGCGCCTTCACCGGTGCGTTGCGCAGCCGCGAAGGCTTGTTCATGCATGCCCATGGCGGCACGGTGTTCCTCGACGAGGTGGGCGAACTGCCGCCTCTGTTGCAGACGCGGTTGTTGCGTGTGCTGGAGGATCGCCGGGTACGTCCGGTCGGCGCGGAGCGGGAGGTGCCCTTCGAGGCGCGTTTCGTCTTCGCCACGAATGCCGATCTCGCGCGGCGGGTGGAAGAGGGCACCTTCCGTGCGGACCTCTATTTCCGCATCAATGTCATCCAGATCCAGCTCCCGCCGCTGAGCGAGCGCGGCGAGGACGTGCTCGAGCTGGCAAACCTGTTCATGCGGGAAATGGCCGGGCAGCTCGGCATGCCCGCCGTCGCCATCACTGAGCGGGTGCAGGGTGCGCTGTTGCGCTACGACTGGCCCGGCAATATCCGCGAATTGCGCAACCTGATCGAGCGCACGCTCATTCTAGGGAGCTTTCCCGATGCGATCGGGCCGGTGCGCGCCGACGCTGTCCCGCCGCGCAACGAGAGCCTGGCCGAGATGGAGCGGCGGCATATCCTCGCCGTGCTGCGCGAGGCGCGCGGCGACCGGGAGGAGGCGGCGCGGCGCCTCGGCATCTCGCGCAAAACCATCGACCGCAAATATGCAAGCTGGCATGAGTGA
PROTEIN sequence
Length: 462
MTQDRNVHALPGQAEFGPWLAQASILVVDDEPGICNFLVKTLRPRCRLIEVASDAAQASRKVDEQNFDVVIMDNIMPGKTGLEWLAEQRAIGLFSDVILMTAYADLDTAIDALRVGVVDFILKPFRSNQLLNAIARCLDRKRLQRENDVLRHEMTAPQHQTLLRNRLIGASKAIAHVRETIARVAPLPTSVLLTGQSGTGKEVAARSLHLLSDRADKLFVPINCGAIPTDMIESELFGHVKGAFTGALRSREGLFMHAHGGTVFLDEVGELPPLLQTRLLRVLEDRRVRPVGAEREVPFEARFVFATNADLARRVEEGTFRADLYFRINVIQIQLPPLSERGEDVLELANLFMREMAGQLGMPAVAITERVQGALLRYDWPGNIRELRNLIERTLILGSFPDAIGPVRADAVPPRNESLAEMERRHILAVLREARGDREEAARRLGISRKTIDRKYASWHE*