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SCNpilot_cont_500_bf_scaffold_6582_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..285

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX00_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 85.0
  • Bit_score: 157
  • Evalue 7.70e-36
Transcriptional regulator {ECO:0000313|EMBL:EYR82256.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 85.0
  • Bit_score: 157
  • Evalue 1.10e-35
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 85.0
  • Bit_score: 138
  • Evalue 1.20e-30

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
CGACAGGTGACGGTGGACGTCAAGGGGCCTTTGATCGTCTCGGACCAGCGGCTGATGCGCGCGGCGGCGATCGACGGCGCCGGCCTTGCCTATGTCTTCGACCAGCGTGTCATGGACGATATCGATGCCGGCAGGCTCATTTCCGTTCTCGAAGACTGGTGCCCGCCCTTCGACGGCTTTTCGATCTACTATCCGACCCGCCGACAGATGCGCCCGGCCCTGCGCGCCTTCATCGACTTCTTCCGCTATACGGGTTCGCCGCCAAGCAACGCGACTCGTGCCTGA
PROTEIN sequence
Length: 95
RQVTVDVKGPLIVSDQRLMRAAAIDGAGLAYVFDQRVMDDIDAGRLISVLEDWCPPFDGFSIYYPTRRQMRPALRAFIDFFRYTGSPPSNATRA*