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SCNpilot_cont_500_bf_scaffold_7655_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(9433..9621)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLJ1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 62.0
  • Bit_score: 114
  • Evalue 3.80e-23
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJD44199.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 62.0
  • Bit_score: 114
  • Evalue 4.10e-23
rbsB; ABC transporter substrate binding protein (ribose); K02058 simple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 109
  • Evalue 5.00e-22

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
GTCGCCGATCCGAACTCGCCGGCCGCCGCCGACGTCGCCCAGCAGCCCGCCGAACTGGGCCGCGTCGCCATCCGCAACGTCGCCCGTCACCTTGCCGGCGAAACGCTGCCGCGCGAAACTTATGTGCCCGCGCTGCTCGCCAACAAGCAGAACGTCGGCGAGATCTCCAAGAAGCTCGGCATCGGCTGA
PROTEIN sequence
Length: 63
VADPNSPAAADVAQQPAELGRVAIRNVARHLAGETLPRETYVPALLANKQNVGEISKKLGIG*