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SCNpilot_cont_500_bf_scaffold_7901_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2679..3176)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035C36A4 similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 165.0
  • Bit_score: 240
  • Evalue 9.30e-61
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJF67497.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 163.0
  • Bit_score: 240
  • Evalue 1.70e-60
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 156.0
  • Bit_score: 178
  • Evalue 1.80e-42

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGACAGCAGGAAACGAGGACATCACCAGCCTCTATGTCGCCGAGGGCGACCGGCTTCGCCGGCAGATCGGCCGCCGCGTCGGCTGCGCCGCGACGGCCTGCGACCTCGTGCAGGATATTTTCCTGCGGCTGTGGGAGCGCGCGCCGGTGCGCAAGGGCAGCGATGCCGCCTATCTCAACCGTTGCGCCCGCAATGCCGCCATCGACCACCTGCGCACCGAGCAGACCCGGCGCGCCTTCGCCAATGGCGTGCTGCCCGAGCAATATGCCGCCCCGCCCGCCTCGCCGCATGAGATACTGGAAGCGCGGCAAGGCGTGCGCAGCATCGACGCGGCGCTGGCGGCCCTGCCGAAGCAGACCCGGCATGTCTTCCTTCTCAACCGCATCCACGGTAGAAGTTTCGCCGAGATCGCAACCGCCATGGGCATATCCGAGCGCATGGTGGCCAAACACATGGCGCGCGCCGTCGCCGCCTGCCAGGAAACGCTTTCCTCCTGA
PROTEIN sequence
Length: 166
MTAGNEDITSLYVAEGDRLRRQIGRRVGCAATACDLVQDIFLRLWERAPVRKGSDAAYLNRCARNAAIDHLRTEQTRRAFANGVLPEQYAAPPASPHEILEARQGVRSIDAALAALPKQTRHVFLLNRIHGRSFAEIATAMGISERMVAKHMARAVAACQETLSS*