ggKbase home page

SCNpilot_cont_500_bf_scaffold_10360_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1168..2958

Top 3 Functional Annotations

Value Algorithm Source
Lysophospholipase n=1 Tax=Rhizobium sp. AP16 RepID=J2WLK8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 579.0
  • Bit_score: 508
  • Evalue 6.60e-141
Uncharacterized protein {ECO:0000313|EMBL:GAJ92617.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 579.0
  • Bit_score: 511
  • Evalue 1.90e-141
putative transmembrane teichuronic acid biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 588.0
  • Bit_score: 507
  • Evalue 7.80e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1791
ATGACGATCATGGCCCAGTTTCCCCGACACCTGCCGAAAAACGAAGAGACGGGACGGCCGCGCACGGCGGCACAGCCTGTAACCTTCTCGGGAACCGTGGGACTGTTCATGCCGGCCCACCCTGCGCTCGCCGCCACACGGCTGGCCGCGCTGTTCGTCAGCCCCTGGGGTTTCGAGGAGCTGTGCCTGCGCAAGACCTGGCGCATCCTCGCCGAAAAGCTTTCCGACGCCGGCATCGCCAGCCTGCGTTTCGACCATGCCAATACCGGCGACGCCCTCGATCATGAGACGCCGACGCTGGCGCTATGGCGCGACACCGTGATCGACGCCGCCGCCGAGCTGAAGCGGCTTTCCGGCGCCGATGGCGTCATCCTCATCGGGCAGGGCCTTGGCGCAGCGCTCGCCGCTGAAGTCGCCGGCCATATCGACGGGGTATGCGGCTATGCGGCGCTGGCGCCGGTCGTGTCCGGCCGGGCGCATCTGCGCGAGCTCGCCCTGTGGTCGAAAATGACCGAGGATCGCACCGATCTCGAACCGGGCGGCGATCCCGTCTCCGGCGGCTCGATGTTGGCCAGGAGCCTGTCGGAGGATATCCGTGCCATCAACCTTTCCAGGACGATGGCGCTGCCGGCGCGCGACTGCCTCGTCGCCGCCCGCGCCGATCGTCCCGGCGATGCGGATCTGGCAAACCGGCTGACCGAACTCGGCGGTGACGTCGTGACCGTCACCTACGAGGGATACGACCGGCTCGTCGGCAACCTCATCTTTTCCAGGCCGCCGCTGACGCTGATCGAAACCATCGTCACCTGGGTGAAAGGGATCGAGGCCGGCCGGCCGCATCTGCAACCGTTTCCGGTTTCCCCGCCCGCGGTGGCAACACCGCTGGCCGGACCCGGCTTCATTGAGACGCCGCTGCGTTTCGGCGACAATGACCGGCTCTATGGCATCCTCTGCGAACCCGCCGACAGCGACGTCAAGGGCGCGATGGTGCTGATGCCGACGACCGCCTATGAGCGCCTGTCCGGCTGGGGCCGCATCGCCACCAGCACCGCCCGCGATCTCGCGTCGGCCGGCATTCCTTCCTTCCGCTTCGATGCCGCCAGTGCCGGCGACAGCCCACCCCTGCCCGGCGCGCCGGAGCAGATCGTCTATTCCGAAGCGCAAGGCCAAGATGCGGAAGCGGCCATCGATTTCCTGGCCCGGAGGCGGCCGGGGCCGATCGTGATTGCCGGCCGCTGCAGCGGAGGTTACCTCGCCTTCCATACGGCGGCGCGCGACAAGCGCATCCGCGCCATCCTCGCCACAAACCCCTACGTCTTCTATTGGGACGGCAGCCAGTCGCTGGAAGAGCTGATGCATTTCATGCCGCAGCAACTCAGCCAATACGGCGTCAAGGCATTCCGCTTCGGCACCTGGAAACGCATCCTCAACGGCGAGATCAATGTCAAATATGCCGTCATCAACATTTCCCGGGCGATCCAGCGCCGCATGCTCGCCGCCGCAGCCCCGATCCTGAAGGCGATCCCTGCCCTGGCGCGCGAACATCGCGCGGTGCATGGCGCCTTCCGGGCGCTGGAGGAGCGCGGCGTGCCCTTCTCGCTGATCTACAGCGAGGGCGATATCGGGCTGGATTATTTCAAGCTGCATTTCGGCCCGAACGGCGAGAAGCTGAAACGCTACGCCAATGTCCGTCATCAGATCGTTGCCGGCGCCGACCACAACCTGTCGACGGACGCCGCCCGCGATCTTTTCCTGCGCGAAATCACCGCCATGGCGCTGGAACATAAATAG
PROTEIN sequence
Length: 597
MTIMAQFPRHLPKNEETGRPRTAAQPVTFSGTVGLFMPAHPALAATRLAALFVSPWGFEELCLRKTWRILAEKLSDAGIASLRFDHANTGDALDHETPTLALWRDTVIDAAAELKRLSGADGVILIGQGLGAALAAEVAGHIDGVCGYAALAPVVSGRAHLRELALWSKMTEDRTDLEPGGDPVSGGSMLARSLSEDIRAINLSRTMALPARDCLVAARADRPGDADLANRLTELGGDVVTVTYEGYDRLVGNLIFSRPPLTLIETIVTWVKGIEAGRPHLQPFPVSPPAVATPLAGPGFIETPLRFGDNDRLYGILCEPADSDVKGAMVLMPTTAYERLSGWGRIATSTARDLASAGIPSFRFDAASAGDSPPLPGAPEQIVYSEAQGQDAEAAIDFLARRRPGPIVIAGRCSGGYLAFHTAARDKRIRAILATNPYVFYWDGSQSLEELMHFMPQQLSQYGVKAFRFGTWKRILNGEINVKYAVINISRAIQRRMLAAAAPILKAIPALAREHRAVHGAFRALEERGVPFSLIYSEGDIGLDYFKLHFGPNGEKLKRYANVRHQIVAGADHNLSTDAARDLFLREITAMALEHK*