ggKbase home page

SCNpilot_cont_500_bf_scaffold_11077_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3147..4247

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 381.0
  • Bit_score: 360
  • Evalue 2.50e-96
rne; ribonuclease E protein; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 386.0
  • Bit_score: 348
  • Evalue 2.20e-93
Ribonuclease E n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U017_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 381.0
  • Bit_score: 360
  • Evalue 1.80e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
GTGGCACTGCATGTCCTGCGCGGCATCGAGGAATATCTCCTCAAGAACACCACGCATGACATCATCGTCCACACCACGCCGGAGACGGCGCTCTACCTGCTAAACCACAAGCGTGGCACCATCGTCGACTACGAACGCCGCTTCGGCGTCTCGATCGTCGTTGAGGCCGACAACGCGGTCGGTTCGCAGCATTTCAGCATCGAGCGCGGCGAGCCGGTGGAAAACCCGGTCAGGATTGAAACCCTGATCCACTTCGAACCCGAGCCCGAGGATGACGACGACATCGTCATCGAGGCGGACGAGGACGAAGAAGACGAAATCGTCAGCGAGCGCGAAGAAAGCGCCGAAAAGGCTGCGCGCAACAATGACGACAACGGCAATCGCAAGCGCAAGCGCCGTCGCCGCCGTCGTGGCAACAAGGGCCAGGCCGGAGACGACCAGGCCATCCGCAGCGACGCGATCGCCGGCGACCAGGACGATGACGAGGATGGCGACGAGGACGAAGGCGATAACGGCGCCGAGTCCGAAGCCGCCACTTCCGACGACCAGCCCAAGCGCAAGCGCCGCCGTCGTGGCAAGCGTGGCGGTCGCCGCAACCGCGAGGATGGCTCGCTGATCGATGAGAACGGCGAAGCCTCCGATGATGGCGACGACGAGGACGAAAGCTTCGAAACCGCCGCGGAAAGCGTGAGCGTATCCGTCGAATCCGCGGAGCCCGACGCCGAGGCACCGGTCGAGCCTGTTGCCGCCGTCGCGGAAGCGGTCCCTGCCGAGGAAAGCGCCAAGCCGGCCAAGGCCCGCCGCAGCCGCAAGGCCAAGGCTTCGCCGGTCGAAGCCCCGGTTGCCGAGGAAGCGGCACCCATGGCAGAGGTCAGCGAAACGGTGGAAATCGCGGCAGATGCTGCCGATCTCCCCGCCGAGCCGGCCGCTATGGATGAGGCTGCGCCCGAAGCCGAGGCCAGGGCGGTGCGTGCCAATCGCGCATCGAATGTCTCCTCGTCGGAGCCGGTTGTGACTTCGAAGCGCGCGACCGCCGATGGCGACGAAGAGCCGCCGAAGCCGAAGAAAGCCGGCTGGTGGCAGCGCCGCGGCTTCCTCTGA
PROTEIN sequence
Length: 367
VALHVLRGIEEYLLKNTTHDIIVHTTPETALYLLNHKRGTIVDYERRFGVSIVVEADNAVGSQHFSIERGEPVENPVRIETLIHFEPEPEDDDDIVIEADEDEEDEIVSEREESAEKAARNNDDNGNRKRKRRRRRRGNKGQAGDDQAIRSDAIAGDQDDDEDGDEDEGDNGAESEAATSDDQPKRKRRRRGKRGGRRNREDGSLIDENGEASDDGDDEDESFETAAESVSVSVESAEPDAEAPVEPVAAVAEAVPAEESAKPAKARRSRKAKASPVEAPVAEEAAPMAEVSETVEIAADAADLPAEPAAMDEAAPEAEARAVRANRASNVSSSEPVVTSKRATADGDEEPPKPKKAGWWQRRGFL*