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SCNpilot_cont_500_bf_scaffold_10023_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2082..2537

Top 3 Functional Annotations

Value Algorithm Source
pilus protein PilZ n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000373030D similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 108.0
  • Bit_score: 132
  • Evalue 3.30e-28
type IV pilus assembly protein PilZ similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 115.0
  • Bit_score: 129
  • Evalue 8.70e-28
Type IV pilus assembly protein PilZ {ECO:0000313|EMBL:AGB70944.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 115.0
  • Bit_score: 129
  • Evalue 3.90e-27

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCGGCTCGAGAAGACGCATTTCGTTCGAATTGAAGCGATCGCGCAAAGCCCGCATGAAGCTTTCCCGCCTAGACTGATGGCTTCGGACATCAGCATGGGGGAAGCCGTGATCAAAGGCCGTATCAATATGGAAACCCGGAAATCGACGCGCAAGGCGGCGCGGATCGTTGGGAAAATCCGCTATGGTTTGCAGGAGGTCGAAGGCCGCGTCGTCAATCTTTCGGCCGATGGCATCGCGCTTGACCTGCAAACGCCACTACATGCCGCGACCGGCAGCCAGGTGAAAATCCAGTGCGACGAGATCGGTTATCTCGAGGGCATGGTGCGTTGGTGCAATCGCGGGCGGATCGGCGTGCGCTTCAGCCCGACCTCAAATGCCCGGGCGCAGGTGACATCCTATTTCCGCTTCGTTCACAAGGATGCGCTTCCGAGCTTCGGTCGCCGCGGCACATAA
PROTEIN sequence
Length: 152
MRLEKTHFVRIEAIAQSPHEAFPPRLMASDISMGEAVIKGRINMETRKSTRKAARIVGKIRYGLQEVEGRVVNLSADGIALDLQTPLHAATGSQVKIQCDEIGYLEGMVRWCNRGRIGVRFSPTSNARAQVTSYFRFVHKDALPSFGRRGT*