ggKbase home page

SCNpilot_cont_500_bf_scaffold_11444_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..967)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 322.0
  • Bit_score: 606
  • Evalue 1.70e-170
spermidine/putrescine ABC transporter ATP-binding subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 324.0
  • Bit_score: 330
  • Evalue 5.40e-88
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGY4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 322.0
  • Bit_score: 606
  • Evalue 1.20e-170
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGGCCATGGTAATGACGAGCGGATCAAGAAAAGCATACGCAGGTGAGCAAAACGCAGTTCGCTTCCATGGCGTGAGCAAGCGTTTCGGTGAAGGCCCGCATGCGCTGACGGTCATTCGCGATCTCAACCTGACGATCGGGAAGGGCGAGTTCTTCTCTCTGCTCGGCCCCAGCGGGTGCGGCAAGACGACGGCCCTGCGCATGATCGGCGGCTTCGAGCATCCGAGCGAGGGCGATGTGCTGCTGGATGGCGAGAGCATCATCGGCGTGCCGCCCTACCGGCGCGACGTCAACATGGTCTTCCAGTCCTATTCGCTGTTCCCGCATATGGATGTCTATGAGAATATCGAGTACGGACTGCGCCGCAAGAAGGTCCCGCGCCAGGAACGGCGCAAGCGGATTGCCGATGTCGTCGCGCTTGCCCAGCTCGACGACTATGTCGCGCGGCGTCCGAACCAGTTGTCCGGGGGCCAGCAGCAGCGCGTCGCGCTCGCTCGCGCGCTCGTCAATCAGCCGAAGGTACTGCTGTTGGACGAACCACTCGCGGCGCTCGACGCCAAGCTTCGCGGCACGATGCAGGAGGAACTCCGCCGCATTCAGCGCGAGGTCGGTATTACCTTCGTTTTCGTCACGCATGACCAGCAGGAGGCGTTTGCCTTGTCGGATCGCGTCGCGGTAATGCGTGCGGGCCGTCTGGAGCAGGCCGGGACGCCACTGGAACTTTACAACAAGCCCGCCACCCGCTTCGTCGCCGATTTCGTCGGGCAGTCGAATTTCATCAGCGGACCGGTTTGCAGTATGGCGCCTTGCCTTCTCGAACTGGGGCAGGAAGGAGACCGCGTCTTTCTTCCCGCGGAAGCGCCCGGTACGGCAGCCACGATCGTCGTTCGGCCGGAGCAGATCGCCTTGCATGCGGACCAGCCGGAATTGCAGGGTGAAAGCCGCTCCCGCCTCGCCGGGGTTGTG
PROTEIN sequence
Length: 322
MAMVMTSGSRKAYAGEQNAVRFHGVSKRFGEGPHALTVIRDLNLTIGKGEFFSLLGPSGCGKTTALRMIGGFEHPSEGDVLLDGESIIGVPPYRRDVNMVFQSYSLFPHMDVYENIEYGLRRKKVPRQERRKRIADVVALAQLDDYVARRPNQLSGGQQQRVALARALVNQPKVLLLDEPLAALDAKLRGTMQEELRRIQREVGITFVFVTHDQQEAFALSDRVAVMRAGRLEQAGTPLELYNKPATRFVADFVGQSNFISGPVCSMAPCLLELGQEGDRVFLPAEAPGTAATIVVRPEQIALHADQPELQGESRSRLAGVV