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SCNpilot_cont_500_bf_scaffold_11942_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 875..1234

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease, L-PSP family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 232
  • Evalue 2.40e-58
Endoribonuclease, L-PSP family protein {ECO:0000313|EMBL:EYR79417.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 119.0
  • Bit_score: 232
  • Evalue 3.30e-58
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 116.0
  • Bit_score: 109
  • Evalue 9.60e-22

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCCATCATCCGCCACCACAGCAGCAACCGTATGAGTCAGATCGTTGAATTCCCGCTGAGCGGCACCATGGTCGTGCTTGCGGGGCAGGTATCTTCCGATCGCGACCTGGAGATTGCCGGGCAGACCGCCAATATCCTCGCCCGGGTCGACGCCTTGCTGGCCGAGGCCGGCACCGGCAGGGCCGCCATCACCCATGCATATATCTGGCTGAAGCACGGCTCGGATTTCGATGCTATGAACAGCGTCTGGGACGCGTGGGTTGCGCCAGATGCCGCGCCCGCGCGGGCCTGCGTGGAGGCGCCGCTTGCCGATCCCCGCCTGCTCGTCGAGATCCAGGTCTTTGCACTGAAGCCCTGA
PROTEIN sequence
Length: 120
MSIIRHHSSNRMSQIVEFPLSGTMVVLAGQVSSDRDLEIAGQTANILARVDALLAEAGTGRAAITHAYIWLKHGSDFDAMNSVWDAWVAPDAAPARACVEAPLADPRLLVEIQVFALKP*