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SCNpilot_cont_500_bf_scaffold_13298_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 496..1893

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase subunit GlcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZY8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 448.0
  • Bit_score: 552
  • Evalue 5.30e-154
  • rbh
FAD-linked oxidase {ECO:0000313|EMBL:KEQ03168.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 461.0
  • Bit_score: 558
  • Evalue 7.90e-156
FAD linked oxidase-like protein similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 433.0
  • Bit_score: 394
  • Evalue 3.40e-107

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Taxonomy

Rhizobium sp. R1-200B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGGCCGAAGACGCAGCCGCAGCACTTTTCGACAGGCTGAAAACGCTCGATCTGGAGATGAGCCTGATCGGCCCCGACGACCTCTCGACGCGCGCGCCAGGGGAGCATCCGCTGAATTTTCAGGGCGGCGTCATGGCCCTGCCCCATACCGTCGAAGCCGTGTCCGACCTGGTGCGCTGGTGCGCGTCGGAAGGCATCGCCATCGTGCCGCAGGGCGGGCGCACCGGCCTTGTCGGCGGCGGCATCAGCCGGCCAGGGGAATTGATCATCTCGACGGCGAAGCTGGCGACCATCGAGGCCATCCATGCGGCCGAGCGCACCGCCGTCGTCCAGGCCGGCGTGACGCTGCAGGCGCTGCAGGAGGCCGCCGCCGAACATGGGCTGACGACCGGCATCGACCTGCCCTCGCGCGGCACGGCCACGATCGGCGGCATGGTCTCCACCAATGCCGGCGGCATCCTCGCCTTCCGCAACGGCGTCATGCGCCATCAGGTGCTCGGCATCGAGGCCGTGTTGCCGAACGGCGAGATCTTCAGCGACCTCACCCGCGTGGTCAAGGTCAGCGCCGGACCGGACCTGAAGCACCTGTTCATCGGCGCGGAAGGCGCGCTGGGGATCGTCACCCGCGTCGTCGTCAAGCTGGAAAGCCGGCGTACGGAGCGGGCGACAGCGCTGATCGGCGTGCCGAACGCGCAGGCCGCGCTCGATATCGTCGGGCATTTCCAGGCGCGGCCGGAGGTGCTGGTCGAGGGCGCGGAACTGATGTGGCGCCAGTTCTTCCGCGATGCCGCCGGTATCTTCGGCTTCGACGCGGGCTGGCTGGAAGAAGAAACGCCGGCGGTGCTGCTGCTGGAGCTCTCCGGCGAAAGCATCGAGCGGACGATGGAACTGTTCGAGGCCGGGCTGGAAACGCTGTGGGAGCCACTGGGGCTGACCGGTGGCATCGTCGCCCAGTCGCTCGACCAGGCGCGAAAGTTCTGGCAGCTGCGCGAAGAATCCGAATTCATCTACCGCCTGCATCCGGCGGCGCTGTCCTATGACATCTCGCTGCCGCCGAGCTATCTCGATACCTATGTCGCGGAGATGCGGGCGCGGCTGGCGGCCGTCGATCCGGCACATAGCGCCTATGTCTACGGCCATATCGCCGACGGCAACCTGCATCTGTCGATCACCAATACGGCGAACATTTCGGCGGAACGGGCGTTGGAGATCGAGGCGGCCGTCTATAGCGGCGTGCGCGAGGCGGCGGGCAGTTTTTCGGCCGAGCACGGTGTCGGCCAGGAAAAGCGCCACGCCTACGAGACCTTCGGCAATCCGGTCAAACGCCTGCTCGCCCGCCAGATCAAGGCGGCGCTCGACCCGAACGGGCTGTTCAATCCGGGCAAGGTTCCATTCTGA
PROTEIN sequence
Length: 466
MAEDAAAALFDRLKTLDLEMSLIGPDDLSTRAPGEHPLNFQGGVMALPHTVEAVSDLVRWCASEGIAIVPQGGRTGLVGGGISRPGELIISTAKLATIEAIHAAERTAVVQAGVTLQALQEAAAEHGLTTGIDLPSRGTATIGGMVSTNAGGILAFRNGVMRHQVLGIEAVLPNGEIFSDLTRVVKVSAGPDLKHLFIGAEGALGIVTRVVVKLESRRTERATALIGVPNAQAALDIVGHFQARPEVLVEGAELMWRQFFRDAAGIFGFDAGWLEEETPAVLLLELSGESIERTMELFEAGLETLWEPLGLTGGIVAQSLDQARKFWQLREESEFIYRLHPAALSYDISLPPSYLDTYVAEMRARLAAVDPAHSAYVYGHIADGNLHLSITNTANISAERALEIEAAVYSGVREAAGSFSAEHGVGQEKRHAYETFGNPVKRLLARQIKAALDPNGLFNPGKVPF*