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SCNpilot_cont_500_bf_scaffold_14505_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1440..2360

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 306.0
  • Bit_score: 469
  • Evalue 4.20e-129
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V5S9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 306.0
  • Bit_score: 469
  • Evalue 3.00e-129
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 306.0
  • Bit_score: 463
  • Evalue 5.10e-128

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGACAGAGACCAAGTCCACTCTTCCGATCGTCTATTCGCGTGAAGTCGCCGACGCCAGGGCCAGGGGCCTGCCGCTGGTGGCGCTCGAATCGACGATCATCACCCATGGCATGCCCTATCCCGGCAATATCGACATGGCGCGCAGCGTCGAGGCGATCATCCGCGCCGAGGGCGCGGTGCCGGCCACCATTGCCGTTCTCAACGGCGTGCTACATATCGGCCTCGAAGAGCCGCAGCTCGAGGCGCTGGCGCAGACCAGGGACGCGATGAAGGTGTCGCGCGCCGACCTACCCTTCTCGATCGCCGAAGGGCGTACCGGAGCGACCACCGTCGCGGCGACGATGATTGCGGCCGCGCTCGGCGGCGTGCGCGTCTTCGCGACCGGCGGCATCGGCGGCGTACATCGCGGCGCCGAGGAAAGCTTCGATATCTCGGCCGACCTCGAAGAATTGGCGCGCACGGCTGTCATCGTCGTCTGCGCCGGGGCCAAGGCGATCCTTGATATTCCGAAGACATTGGAAGTGCTGGAAACGCGCGGCGTACCGGTCGTTACCTTCGATTCGCGCGATTTCCCGGCCTTCTGGTCGCGGGTCTCGGGCTTTGCCAGCCCGCTGACCCTGAATAGCGCCGAAGGCATCGCCCGCTTCCAGTCCGTGCGCGAACAGATGGGCATCGGTGGCGGCATGCTGATCGCCAATCCGGTGCCGGAGCAGGATGAAATCGGCCGGGACGAGATGGAAGGCTTTATCAGCCAAGCCATTGATGCGGCGGAAGAAGACGGCATTAGCGGCAAGGCGGTGACACCCTACCTGCTGTCGAAAATCTTCGACCTGACAAACGGCCGCAGCCTCAAGACCAATATCGCGCTGGTGGAAAACAATGCCCGCCTCGCCGCTCGCATCGCGGTCGCGCTGAAATAA
PROTEIN sequence
Length: 307
MTETKSTLPIVYSREVADARARGLPLVALESTIITHGMPYPGNIDMARSVEAIIRAEGAVPATIAVLNGVLHIGLEEPQLEALAQTRDAMKVSRADLPFSIAEGRTGATTVAATMIAAALGGVRVFATGGIGGVHRGAEESFDISADLEELARTAVIVVCAGAKAILDIPKTLEVLETRGVPVVTFDSRDFPAFWSRVSGFASPLTLNSAEGIARFQSVREQMGIGGGMLIANPVPEQDEIGRDEMEGFISQAIDAAEEDGISGKAVTPYLLSKIFDLTNGRSLKTNIALVENNARLAARIAVALK*