ggKbase home page

SCNpilot_cont_500_bf_scaffold_14552_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(51..590)

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase gamma subunit n=1 Tax=Rhizobium sp. AP16 RepID=J2WZT0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 182.0
  • Bit_score: 190
  • Evalue 2.00e-45
Uncharacterized protein {ECO:0000313|EMBL:GAJ93896.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 182.0
  • Bit_score: 191
  • Evalue 9.80e-46
sarcosine oxidase gamma subunit similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 7.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGCTTTATGCCGCGTCATATTCTGGAAGAGCGCATCGGCGATTTCGGCCGGCCCGTGCATGCCGATCACCTGACGGTGCTGCGCCGTCCGGCCATCGCCTCGGTGCTGGCCGGTGGACCGGTGGAGGCACTGTCGGGCATGGCCGAAGTGAGCTTGCGCCCGGTCGGGCCGGGGCAGTGGCTGGCGGTGTCGCAGAGCCTGCCGGGGTCGCTGCTGGCCGAATCCCTCGCCGCAGCGCTGGCCGGGCTGGGCGCGCATGTGGTCGACCAGAGCGACGGCTTCGTGCTGATGCACATCGCCGGGCCGAACGTCCGCCGTATCCTGGCGAAATGCATCGCGGTCGATTTGCATGGGGATGTTTTCGCAATTGGACAGGCGGCGGCGATGATGTGCTGCCATGTGGCGGCGAATGTGGCGCGCGTCGGGGCGGATGCCTTCGAGATCGCCGTGCCGCGCTCCTATGCCGACGACGTCTTCGAGGAGATCGTCGAAATGGGCCGCGAATTCTCGCTGACCAGCGCCTTCGACGACGCGTGA
PROTEIN sequence
Length: 180
MSFMPRHILEERIGDFGRPVHADHLTVLRRPAIASVLAGGPVEALSGMAEVSLRPVGPGQWLAVSQSLPGSLLAESLAAALAGLGAHVVDQSDGFVLMHIAGPNVRRILAKCIAVDLHGDVFAIGQAAAMMCCHVAANVARVGADAFEIAVPRSYADDVFEEIVEMGREFSLTSAFDDA*