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SCNpilot_cont_500_bf_scaffold_15735_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3513..4079

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCA0D similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 188.0
  • Bit_score: 359
  • Evalue 2.70e-96
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:CDN92211.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 373
  • Evalue 1.90e-100
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 188.0
  • Bit_score: 292
  • Evalue 7.40e-77

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCAAGACCTCGAGAATTCGATACGGATGCTGCCCTGGACGGTGCGATCGCCGTGTTCAGCGAGCATGGGTATGAGGGCAGTTCGGCGCAGATGCTCGTGGACGCCATGGGCATCGGGCGGCAGAGCCTCTACGCGGCCTTCGGCGACAAGTGGCAGCTCTATTGCGCGGCGGTGCGGCGCTACGGCATGGGCGAATGCGCGGCGCATTTCGAGGCGCTTCGCAGCGGCGCGCGCGCCATCGACGGGATTGCCGCCATGCTGCGCCATGTCGTGGAGACAGCGTACACGCCCTGTCTCGGCGTCGGCTCGACCTGCGAGTTCGGTGCCTCGCGGCCGGACCTGGTCGATATCCATGCGGCACTGGGCAGGACATTGCACATGGCCATCGTCGCCCGCATGTGCGACGCGCAGCGTGAGGGCGATGTTGCAGCCAGCCTCGATCCCGAGGCTCTCGCGCAATTCCTGATCGCCAATATCGCCGGGATCCGCGTCGCCGGGCGTGGCGGCGCCGACCGATCAACCCTGGCTGCCCTGCAGGAGATGGTCATGCGCGCGCTGCGCTGA
PROTEIN sequence
Length: 189
MARPREFDTDAALDGAIAVFSEHGYEGSSAQMLVDAMGIGRQSLYAAFGDKWQLYCAAVRRYGMGECAAHFEALRSGARAIDGIAAMLRHVVETAYTPCLGVGSTCEFGASRPDLVDIHAALGRTLHMAIVARMCDAQREGDVAASLDPEALAQFLIANIAGIRVAGRGGADRSTLAALQEMVMRALR*