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SCNpilot_cont_500_bf_scaffold_19127_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 3..698

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSH9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 231.0
  • Bit_score: 424
  • Evalue 8.30e-116
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 231.0
  • Bit_score: 424
  • Evalue 2.60e-116
Strain MEJ076 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02415.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 231.0
  • Bit_score: 424
  • Evalue 8.90e-116

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
AAAGACAGGCACATAGCAACGGTTATGGCCGGGATCCGCAACAGCCATGCGAGGCCCCCTGTCCAGAAGGAAGCGGTCATGGTCGAAGATATTCTCGCCATGATCGAAACCCTCGACCGAGGCACGCTACGTGGTTTGCGCGATCGAGCCATGCTGTTGATCGGTTACACGGGCGGACTTCGCCGCTCGGAGATCGTCGGCCTCGATCTGAAGGCTGACCAGACGGAAGACGGACGCGGCTGGATCGAAATTCTCGACAAAGGAATGCTGATCACCCTGCGAGGCAAGACAGGGTGGCGAGAGGTGGAGATAGGCCGCGGCTCATCCAACGCCACCTGCCCTGTTGCCGCAATCGAAACCTGGATAAAATTCGCCAAGCTCGCGCATGGTCCTCTCTTCCGCCGCGTTACTGCAAATGGAAAGACTGTCGGGCCGGATCGATTGAACGACAAGGAGGTCGCGCGATTGGTGAAACGCACCGCGATGGCCGCTGGCGTTCGTGGCGATCTGAGCGAGGCCGAGCGTGTCTCCAAGTTTTCCGGCCACTCGCTACGCGCGGGCCTCGCTTCGTCTGCCGAAGTCGACGAACGATATGTGCAAAAGCAGTTGGGCCACGCTTCGGCTGAAATGACCCGCCGATATCAACGTCGTCGCGATCGCTTCCGCGTTAATTTGACCAAGGCTTCAGGTCTCTAA
PROTEIN sequence
Length: 232
KDRHIATVMAGIRNSHARPPVQKEAVMVEDILAMIETLDRGTLRGLRDRAMLLIGYTGGLRRSEIVGLDLKADQTEDGRGWIEILDKGMLITLRGKTGWREVEIGRGSSNATCPVAAIETWIKFAKLAHGPLFRRVTANGKTVGPDRLNDKEVARLVKRTAMAAGVRGDLSEAERVSKFSGHSLRAGLASSAEVDERYVQKQLGHASAEMTRRYQRRRDRFRVNLTKASGL*