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SCNpilot_cont_500_bf_scaffold_21179_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..679)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF080 RepID=J2R697_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 211.0
  • Bit_score: 156
  • Evalue 2.40e-35
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EUB95675.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 211.0
  • Bit_score: 156
  • Evalue 3.40e-35
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 119.0
  • Bit_score: 137
  • Evalue 4.70e-30

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGACGTGCAACCATCCCGATCTGACATCGGCGCAGCAGGGAAAAACGGTTCCGGCTCTACGGAAGACGGATTCGATCTGCTGGACTCTGCGCCCGTTCCACTGGCGCTCGTCACCCTCGAAGGTGACATCCTGCGGGCCAATACCGGATTTTTCAGGCTTGCCGATGGTCGTGCGGCGAATGCTTCCGGTCTGGCCGAACTGGTTTTTCCAGAAGATCGCGATCGACTGTTTGCCTGGCTCAAAGACGGAATTTCGGGTGAAACGGCGGAATTTCGACTTGCGGGGGGCTCATTCTGGGTTTCGGCCTCGGTGTCCCCGGCTGATGACGAGACTGCTCGTCTCCTCGCTCTCACGGATATTACCCAGCTCAAGCGTGAGGTCCAAGACCTCGCCATGCGTGAGCGGCGCTGGCATGATGCGTTGACCAATTCCGGACTCGGCGTCTGGGACCAGAATTATGGCGCCGGCGTCATGTATTATTCCGATACCTGGCGCGCCATCCGCGGCATCGGCCCGGACGAGACCCTGAACGAAGGCATGGACGACTGGATCCTGCTGGTCCATCCCGACGACCGCGCATTCGTCATCGACGCTATCCACCGCCAGAACCGCGGCGATCCGGATTTCGCCGTCTTCCAATATCGCGAGCGCAACCGCGGGGGCGGCTGGGTCTGG
PROTEIN sequence
Length: 226
MDVQPSRSDIGAAGKNGSGSTEDGFDLLDSAPVPLALVTLEGDILRANTGFFRLADGRAANASGLAELVFPEDRDRLFAWLKDGISGETAEFRLAGGSFWVSASVSPADDETARLLALTDITQLKREVQDLAMRERRWHDALTNSGLGVWDQNYGAGVMYYSDTWRAIRGIGPDETLNEGMDDWILLVHPDDRAFVIDAIHRQNRGDPDFAVFQYRERNRGGGWVW