ggKbase home page

SCNpilot_cont_500_bf_scaffold_23708_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3055..4290)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbE n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GHS2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 411.0
  • Bit_score: 807
  • Evalue 6.20e-231
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EQA99582.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 411.0
  • Bit_score: 807
  • Evalue 8.60e-231
virB4; type IV secretory pathway VirB4 component; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 409.0
  • Bit_score: 773
  • Evalue 3.10e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1236
CCGCTTTCGGCGGTGTGGGCGGGGCCGGAACGGGACGAGCATTTTGCAGCGCCCCCACTGCTCTTCGGCAAGACCGAAGGCTCGACTCCGTTCCGGTTTTCCCTTCACGTCGGCGATGTCGGCCATACGCTCGTCGTTGGCCCGACCGGCGCGGGCAAGTCCGTGCTGTTGGCGCTGATGGCCCTGCAGTTCCGCCGCTACGCCGGCGCACAGGTCTTCGCCTTCGACTTCGGCGGCTCGATCCGCGCCGCCGCACTCGCGATGCGCGGAGACTGGCACGATCTCGGCGGCGGCCTGACGGACGGCTCGGAGACCTCCGTCTCGCTTCAGCCGCTGGCGCGCATCGGGGAGACGAGCGAACGCGCTTGGGCCGCCGACTGGATCGTCGCCATCCTGACACGGGAGGGCGTCGCCATCTCGCCGGAGGTGAAGGAGCATATCTGGACAGCGCTGACCTCGCTGGCTTCGGCGCCGGTCGAGGAACGCACGATCACCGGCCTCTGCGTGTTGCTCCAGTCCAACGACCTGAAGCAGGCGCTCCGCCCCTATTGCATCGGCGGCGCATGGGGCCGGTTGCTCGACGCCGAGAGCGAACATCTCGGCACTGCGACGGTCCAGGCGTTCGAGACCGAGGGGCTGATCGGAACCGACGCCGCGCCGGCCGTGCTGGCCTATCTTTTCCACCGGATCGAAGATCGGCTCGACGGTTCACCGACCCTCATCATCGTCGATGAAGGCTGGCTGGCGCTGGACGACGAGGGTTTTGCCGGCCAGCTCCGTGAATGGCTGAAGACGCTCAGGAAGAAGAACGCCTCCGTCATCTTCGCCACGCAGAGCCTGTCGGATATCGACGGCAGCACCATTGCGCCTGCCATCATCGAGAGCTGCCAGACCCGGCTTCTGCTCCCCAACGAACGGGCAATCGAGCCGCAGATCACTGCCATCTATCGCCGTTTCGGTCTCAACGATCGCCAGATCGAGATCCTCGCGCGGGCCATGCCGAAGCGCGACTATTACTGCCAATCCCGACGAGGCAACCGGCTGTTCGAACTCGGCCTTTCGGAGGTCGCGCTGGCGCTCTGCGCCGCATCCTCCAAGACCGATCAGGCAGCCATCGCTCGCATCACAGCCGAGCACGGCCCGGATGGCTTCCTCGATGCCTGGCTACGCCTGCGCGGCGCCGGCTGGGCCGCCGACCTCATTCCCAACCTCACCAACCTGGAGAAACTGCCATGA
PROTEIN sequence
Length: 412
PLSAVWAGPERDEHFAAPPLLFGKTEGSTPFRFSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGAQVFAFDFGGSIRAAALAMRGDWHDLGGGLTDGSETSVSLQPLARIGETSERAWAADWIVAILTREGVAISPEVKEHIWTALTSLASAPVEERTITGLCVLLQSNDLKQALRPYCIGGAWGRLLDAESEHLGTATVQAFETEGLIGTDAAPAVLAYLFHRIEDRLDGSPTLIIVDEGWLALDDEGFAGQLREWLKTLRKKNASVIFATQSLSDIDGSTIAPAIIESCQTRLLLPNERAIEPQITAIYRRFGLNDRQIEILARAMPKRDYYCQSRRGNRLFELGLSEVALALCAASSKTDQAAIARITAEHGPDGFLDAWLRLRGAGWAADLIPNLTNLEKLP*