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SCNpilot_cont_500_bf_scaffold_27172_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(374..853)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator AsnC family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JV00_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 153.0
  • Bit_score: 220
  • Evalue 1.20e-54
putR; transcriptional regulator AsnC family; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 153.0
  • Bit_score: 220
  • Evalue 3.90e-55
Transcriptional regulator AsnC family {ECO:0000313|EMBL:ACM38138.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 153.0
  • Bit_score: 220
  • Evalue 1.80e-54

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCTCAGACTTCGATTTCAGGCGAATTGGATAGCTATGATATCAAGATTATCCAGGCGCTCGTCGATGACGGACGCCTGTCGATCACCGACCTCTCGGAAAAGGTCGGCCTGTCGAAGACACCCTGCCACCAGCGACTGAAACGGTTGATCAAGGATGGTTACATCCTCGGCTTTCGCGCCGTACTCGATCCGCAGAAACTCGGGCTCGACCATGTCGCCTATACCGAGGTGAAACTCTCCGACACCCGCGAGGCGGCGCTGCACAGTTTCAACGAGGCGGTGCGCAATATCCGGGAGATCGAGGAATGCCAGATGATCGCCGGCTCCTATGATTACCTGCTCAAGGTTCGCACCGCCGACATGCGCCGCTTCCGCCGGGTGCTCGGCGAATATATCTCGACGCTACCGCATGTCGCCAGCACCTCCACCTTCGTGGTGATGGAATCGGTGAAGGAGGCCAATCTGCGGCCGGCTTAA
PROTEIN sequence
Length: 160
MAQTSISGELDSYDIKIIQALVDDGRLSITDLSEKVGLSKTPCHQRLKRLIKDGYILGFRAVLDPQKLGLDHVAYTEVKLSDTREAALHSFNEAVRNIREIEECQMIAGSYDYLLKVRTADMRRFRRVLGEYISTLPHVASTSTFVVMESVKEANLRPA*