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SCNpilot_cont_500_bf_scaffold_42390_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 815..1342

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 175.0
  • Bit_score: 301
  • Evalue 8.60e-79
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 1.10e-77
peptide deformylase n=1 Tax=Rhizobium phaseoli RepID=UPI0003038F89 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 175.0
  • Bit_score: 300
  • Evalue 1.40e-78

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGGAAAGCCCATGTCTATCAAGCCTCTCATCATTCTGCCCGATCCCCTGCTGCGCCAGGTGTCCGCTCCTGTCGAACGCGTCGACGACGATCTGAAGCGTCTGGCCGACGACATGCTGGAGACCATGTATGACGCGCCGGGCATCGGGCTTGCGGCGATCCAGATCGGCGTGCCGCGCCGCATGCTGGTCATCGACCTTGCCAAGGACGGCGAGGAGAAGCAGCCACAGGTGTTCATCAATCCTGAGATCATCGCCTCGTCGGATGCCCGTTCGGTCTATGAGGAAGGCTGCCTGTCGATTCCCGAATACTATGCCGAGGTCGAACGCCCGGCCGAAGTCGAGGTGGCCTATCTCGACCGCGAGGGCAAAGAGAGCCGGGTCAAGGCCGAAGGCCTGCTCGCCACCTGCCTGCAACACGAGATCGACCACCTGAGCGGCGTGCTGTTCATCGACCATATCTCGCGTCTCAAGCGGGAAATGGTGGTGCGCAGGTTCACCAAGGCGGCCAAGTCCAAAGCAATCTAA
PROTEIN sequence
Length: 176
MGKPMSIKPLIILPDPLLRQVSAPVERVDDDLKRLADDMLETMYDAPGIGLAAIQIGVPRRMLVIDLAKDGEEKQPQVFINPEIIASSDARSVYEEGCLSIPEYYAEVERPAEVEVAYLDREGKESRVKAEGLLATCLQHEIDHLSGVLFIDHISRLKREMVVRRFTKAAKSKAI*