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SCNpilot_cont_500_bf_scaffold_47334_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1..201

Top 3 Functional Annotations

Value Algorithm Source
Pectin degradation repressor protein kdgR n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BFU3_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 61.0
  • Bit_score: 69
  • Evalue 1.10e-09
IclR family transcriptional regulator {ECO:0000313|EMBL:KDP72037.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 61.0
  • Bit_score: 72
  • Evalue 3.20e-10
kdgR; Pectin degradation repressor protein kdgR similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 61.0
  • Bit_score: 65
  • Evalue 6.80e-09

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
CATGAAGACGGCATTCACTGCGTGGCTGCGCCCATCGTCTCGCCGGATGCCTCTCTTGCCGGCGGGGTGTCCGTCACCGCGCCGTCTTTTCGTGTCGCCATGGCGCAGATGGCCGATTGGGCGCCGGCCGTGCGCGATGCCGGACGCGCCGTCAGCCGTGACATTGCCGTGCGGATGAGCCCGCGACCCGCATGGGGCTGA
PROTEIN sequence
Length: 67
HEDGIHCVAAPIVSPDASLAGGVSVTAPSFRVAMAQMADWAPAVRDAGRAVSRDIAVRMSPRPAWG*