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SCNpilot_cont_500_bf_scaffold_46161_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2611..3909

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FE03_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 435.0
  • Bit_score: 755
  • Evalue 3.80e-215
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 435.0
  • Bit_score: 755
  • Evalue 5.30e-215
sigA; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 437.0
  • Bit_score: 749
  • Evalue 5.00e-214

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGCTTTCCGACATGGGCATCAACGTCGTCGAGGACGAAGACATCGACGAGCAGGCAACTGCCGACGATGATGACAGCGAAAGCGACGGCGAGAGCGAGGGCGGCGAACTGGCCCCCAGCGCCGGCACCCAGCTTGCGACCGCCAAGAAGAAGGAACCGACCGACCGCACGGACGACCCGGTGCGCATGTATCTGCGCGAAATGGGGTCGGTCGAGCTCCTGTCGCGCGAAGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGTCGCGAAACGATGATTTCGGGCCTCTGTGAGAGCCCGCTCACCTTCCAGGCGCTGATCATCTGGCGCGACGAGCTGAACGAAGGCTCGACGCTGCTGCGCGAGATCATCGACCTCGAAACCACCTATTCCGGTCCTGAGGCCAAGGCGGCGCCGCAGTTCCAAAGCCCGGAAAAGATCGAGGCCGACCGCAAGGCGGCGGAAGAGAAGGAAAAGACCCGCCGTCCGCGCATGCCGGCGCCCGGCGAAGACGACATCACCGATATCGGCGAAGCCATGCCGGTCGAGGAGGAAGAGGAAGACGAGGATGAATCCTCGCTGTCTCTCGCCGCGATGGAAGCCGAGTTGCGCCCGCAGGTCATGGAAACCCTCGACCTGATCGCCGATACCTACAAGAAGCTCCGCAAGCTGCAGGACCAGCAGGTCGAGGCGCGCCTTGCAGCCGTCGGCACGCTGTCGTCCGGCCAGGAGCGCCGCTACAAGGAATTGAAGGATCAGTTGATCACGGCGGTCAAGTCGCTGTCGCTCAACCAGAACCGCATCGATTCGCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTCGTGCAGAACGAGGGCCGCCTGCTGCGTCTGGCCGAATCCTACGGGGTTCGCCGCGAAAGCTTCCTCGAACAGTATCAGGGCGCGGAGCTCGATCCGAACTGGATGAAGTCGATCTCGAACCTCGCCGCCAAGGGCTGGAAGGAATTCGCCCGCGCCGAGAATTCAACGATCCGCGACATCCGCCAGGAGATCCAGAACCTCGCCACCGAAACCGGTATCTCGGTGACGGAATTCCGCCGCATCGTGCATATGGTGCAGAAGGGCGAGCGCGAGGCGCGCATCGCCAAGAAGGAAATGGTCGAGGCAAACCTGCGCCTCGTCATCTCCATCGCCAAGAAATACACGAACCGCGGCCTGCAGTTCCTCGACCTTATCCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTAT
PROTEIN sequence
Length: 433
MLSDMGINVVEDEDIDEQATADDDDSESDGESEGGELAPSAGTQLATAKKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMISGLCESPLTFQALIIWRDELNEGSTLLREIIDLETTYSGPEAKAAPQFQSPEKIEADRKAAEEKEKTRRPRMPAPGEDDITDIGEAMPVEEEEEDEDESSLSLAAMEAELRPQVMETLDLIADTYKKLRKLQDQQVEARLAAVGTLSSGQERRYKELKDQLITAVKSLSLNQNRIDSLVEQLYDINKRLVQNEGRLLRLAESYGVRRESFLEQYQGAELDPNWMKSISNLAAKGWKEFARAENSTIRDIRQEIQNLATETGISVTEFRRIVHMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTY