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SCNpilot_cont_500_bf_scaffold_53696_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 357..1232

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:EYR78430.1}; EC=3.6.3.31 {ECO:0000313|EMBL:EYR78430.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 268.0
  • Bit_score: 476
  • Evalue 3.20e-131
Spermidine/putrescine ABC transporter n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q2F0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 264.0
  • Bit_score: 456
  • Evalue 2.50e-125
spermidine/putrescine ABC transporter similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 264.0
  • Bit_score: 394
  • Evalue 2.80e-107

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
TTGCCGTCTTCGGCCGCCTTCGCGCGCCCGGTGGATGGCGGAGCCTTGCGCGAAAAGTCCGGGCCTGAACTGGTGGGAAAAGACGTGTCATCCGTCCTTCAACTGAAGAATGTGCACAAGGCCTTCTCCGGCGTGCCGGCGCTGGCCGGCGTCGATGCGGCGCTGTCGGAAAACTCCTATGTCTCGCTGCTGGGGCCGAGCGGATCGGGCAAGACGACGCTGCTGCGCGTCATCGCCGGTTTCGAGCAGCCGGATGGCGGCGAGATCCTGTTTGGCGGCAGGCGCATCGACGGCGTTGCCCCGCACGCGCGTGGTATCGGCTTCGTCTTCCAGAATTTCGCCCTCTTCCCGCATCTCAGCGTCGCGCAGAACATTGCCTTCGGCCTCGAAAACCGCGCCGTCGATCCGGTGACGGATACCAGGGCCGCGGCCGCGAAGGTGCGCGACATGGTCGGTCTCGTCGGTCTTTCCGGGCTGGAGGACCGGGCGGTCACACAGATCTCCGGCGGCCAGAAGCAGCGCGTGGCGCTTGCCCGCACGCTGGTGACGGAGCCGAGCATGGTGCTGCTCGACGAGCCGCTTGGCGCGCTCGACGCCAATCTGCGCGCCCGCATGCGCGGCGAACTGCGCACCATCCGCGAGCGCTGCGGCGTCACCTTCCTGCATGTCACCGGCTCGGAGACCGAGGCGCTGGCCATGGGCGATACCGTGCTGGTGCTCGATCGCGGCCGCATCGCCCAATCCGCCGATGCGGGCACGCTCTATAGCCGCCCGGCCTCGGCCGATGTCGCGCGGTTTCTCAATTGCTACAACATCTTCCCTGGAACGGTTTCAGGCGATGCCTTCGAAAGCTCCGTCGGACGGCTGGCGCTGGGC
PROTEIN sequence
Length: 292
LPSSAAFARPVDGGALREKSGPELVGKDVSSVLQLKNVHKAFSGVPALAGVDAALSENSYVSLLGPSGSGKTTLLRVIAGFEQPDGGEILFGGRRIDGVAPHARGIGFVFQNFALFPHLSVAQNIAFGLENRAVDPVTDTRAAAAKVRDMVGLVGLSGLEDRAVTQISGGQKQRVALARTLVTEPSMVLLDEPLGALDANLRARMRGELRTIRERCGVTFLHVTGSETEALAMGDTVLVLDRGRIAQSADAGTLYSRPASADVARFLNCYNIFPGTVSGDAFESSVGRLALG