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SCNpilot_cont_500_bf_scaffold_58962_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(486..1139)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB4 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXH1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 217.0
  • Bit_score: 428
  • Evalue 3.10e-117
Type IV secretion/conjugal transfer ATPase, VirB4 family {ECO:0000313|EMBL:EYR82770.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 217.0
  • Bit_score: 428
  • Evalue 4.40e-117
avhB4; type IV secretion protein AvhB4; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 213.0
  • Bit_score: 279
  • Evalue 1.30e-72

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ACCGGCGACAAGGGCTGGCTGTTCAACAACCCGACCGACAGGCTGGACTTTGCCGGTTCGGTGATCGGCTTCGACATGACGGAGATCCTGTCCGACATGCGCACACGCTCGGCGGCTCTGCTTTATATGTTCCATCGCATTCAGGAGATCCTCGACGGCCGCCCCTCGATGATCTTTCTCGATGAGGGCTGGCGCCTGCTTGATGACGACGTCTTCTCCGGCTTCATCAAGGACTGGCTGAAGACCATCCGAAAAATGAACGGCATCGTCGGCTTCGGCACGCAGTCGGCGGCGGATGTGGTGCGCTCCGATCTGCGCAACACGATCATCGAACAGACAATGACCAACATCTTCTTCCCGAACGCTTCCGCGGACGAGGAGAGCTACCGGAAAGCCTTCGGCCTGTCCGAAAAGGAATTCCGCTTTGTGAAGCAGGCGGACAAGGCGAGCCGCACCTTCCTCATCAAGCACGCCCAGGACTCGGTGATCGCACGGCTCGATCTGTCGGCGATGCCCGACCTGGTGAAGGTCTTGTCCGGGCGGCCTGAGACGGTGCGCGAGTGCCAGACGCTGCGCGAGACCTATGGCGACGAGCCGGCCGCCTGGCTCCCGCATTTTTGTGGCTGGACCATTCCGGAGGCGCCCGATGCGTAA
PROTEIN sequence
Length: 218
TGDKGWLFNNPTDRLDFAGSVIGFDMTEILSDMRTRSAALLYMFHRIQEILDGRPSMIFLDEGWRLLDDDVFSGFIKDWLKTIRKMNGIVGFGTQSAADVVRSDLRNTIIEQTMTNIFFPNASADEESYRKAFGLSEKEFRFVKQADKASRTFLIKHAQDSVIARLDLSAMPDLVKVLSGRPETVRECQTLRETYGDEPAAWLPHFCGWTIPEAPDA*