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SCNpilot_cont_500_bf_scaffold_13696_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: 3..482

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Microbacterium RepID=H8E1N6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 161.0
  • Bit_score: 296
  • Evalue 1.80e-77
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EIC09056.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 161.0
  • Bit_score: 296
  • Evalue 2.50e-77
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 158.0
  • Bit_score: 279
  • Evalue 9.30e-73

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGCAGGAGACCTTCGTGAAGGCGTTCGCCTCGTGGGCATCCTTCACCCAGGGCACGAACCTCAAGGCGTGGCTGTACCGGATTCTGACCAACACGTACATCAACACGTATCGCAAGAAGCAGCGTGAGCCCTACCAGGGCACGATCGACGACCTCGAGGACTGGCAGCTCGGCGGCGCCGAGTCGACGACCGCGACGAGCACCCGCTCGGCCGAAGCCGAAGCGATCGACCACATGCCGGCATCCGTCGTCAAGGATGCCCTGCAGTCGCTGCCCGAGGACTTCCGCCTCGCGGTGTACCTCGCCGACGTCGAAGGCTTCGCGTATCAAGAGATCGCGGACATCATGAAAACCCCCATCGGCACGGTCATGAGCCGTCTGCATCGCGGCAGGCGGATGCTGCGTGACCTGCTGGCCGACTACGCGCGGGAGCGCGGCATCAAGGTGCCGGCTGCCGCCCCCTCAAGGAGCAAGAAATGA
PROTEIN sequence
Length: 160
VQETFVKAFASWASFTQGTNLKAWLYRILTNTYINTYRKKQREPYQGTIDDLEDWQLGGAESTTATSTRSAEAEAIDHMPASVVKDALQSLPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRDLLADYARERGIKVPAAAPSRSKK*