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SCNpilot_cont_500_bf_scaffold_17981_3

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: 1600..2604

Top 3 Functional Annotations

Value Algorithm Source
ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 327.0
  • Bit_score: 309
  • Evalue 1.30e-81
  • rbh
ornithine cyclodeaminase n=1 Tax=Yaniella halotolerans RepID=UPI0003B67B4C similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 325.0
  • Bit_score: 329
  • Evalue 5.20e-87
  • rbh
Strain UM270 sctg_0003_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ61371.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 327.0
  • Bit_score: 315
  • Evalue 8.40e-83

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGAGCGAGTCCGGATTCCGCGCCGAGCCGCCCACGCTGTTCCTGACCGACGCCGACGTCGCGGCCCTCGCCGACTGGGACGACGCGATCGCGGCCCTGCGCGCGGCCTACGCCCGCCCCGACGAGCCGACGCGCACGCCCGAGCGCACGGTCGCGGTGACGGATGCCGGGTGGCAGCGCATCCTGCCGGCGGCACCGGCGGGTGGTCGGTTCGCCGGGTCGAAGACCATCGCGGCGTCGCTGCGCAACGGGCTCGCGAGCTATCTGATCACGCTGTTCGACCAGAACGACGCGCGCCTCGCGGCACTCATCGACGGCAATCGCATCACGGGCATCCGTACCGCTGCCACGGCGGCCGCGGCTCTGACGGCGATGCTGCCGGATCGGCCGGTGCGCGTCGCGGTCGTGGGCAGCGGGTTCGAAGCCCGGGCGCAGCTGCGGGCGGCATCGCGCGTGGCCCGCATCACGGAGGTGCGCGTGACGAGTCCGACTCCCGCGAATCGGGAGCGGTTCGCGCGCGAGCTCGGCGACGAGCTCGGTCTGGAGGTCACCGCGACGGCGAGCGCCGAAGAGGCCGTCCGCGGCGCCGACCTCGTGCTGTGCGCCGCGCGGTCACGCGATGAGTCCCCGACCGTCCTCGCCGAGTGGGTCGCGCCCGGCGCGACCGTCGTCTCGATCGGGTCGACGACGCGAAGCCAGCGCGAACTCGACGCCGCACTCGTCGGGCGCGCGGCGCTCATCGTGGCGGATGCCGTCGCCGAGGTCCTGCACGACAGCGGCGACCTCATCGCCGCGCGCGCCGCCGGGTTCGACCCGGACGCCGTCACGGTGTCGCTGCACGCGCTGTTGGGCGGCGACGTCACGCGGCCAGACGGCATCGCGATCTACAAATCCACCGGCAGCGGCTTCCAAGACATCGTCCTGGCCGAGCAGCTGTACGACCGCGCCGTCGCGCAGGGCGTCGGAACGCCCCTGCCCGTCGGCATCCTCACCATCCGAAAGTAG
PROTEIN sequence
Length: 335
MSESGFRAEPPTLFLTDADVAALADWDDAIAALRAAYARPDEPTRTPERTVAVTDAGWQRILPAAPAGGRFAGSKTIAASLRNGLASYLITLFDQNDARLAALIDGNRITGIRTAATAAAALTAMLPDRPVRVAVVGSGFEARAQLRAASRVARITEVRVTSPTPANRERFARELGDELGLEVTATASAEEAVRGADLVLCAARSRDESPTVLAEWVAPGATVVSIGSTTRSQRELDAALVGRAALIVADAVAEVLHDSGDLIAARAAGFDPDAVTVSLHALLGGDVTRPDGIAIYKSTGSGFQDIVLAEQLYDRAVAQGVGTPLPVGILTIRK*